| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
Click here to switch to the map view.
The map label for this gene is 82703141
Identifier: 82703141
GI number: 82703141
Start: 2316954
End: 2317736
Strand: Direct
Name: 82703141
Synonym: Nmul_A2020
Alternate gene names: NA
Gene position: 2316954-2317736 (Clockwise)
Preceding gene: 82703140
Following gene: 82703147
Centisome position: 72.76
GC content: 54.53
Gene sequence:
>783_bases GTGCCCCTTTTTTTCCACTCGTATATCACTGGACCGAATGGGGAGGGAAGGACTCCGATAAAGTCTTTAGCTAAAAATGA ATCTGACTTCACTGTAGCTTACGGTATCAATGATGCCGGACAGGTAGCAGGGGGATCATGGACGGGCGAAGGCGGTTCGA ATCATGCTTTCATAACTGGCCCAAATGGTGTGGGCACGATAGATCTAGATCTTTTCGGCGGAAATCACAGTAGGGCCATC GGCATTAATAATACTGCCCAGGTAGCGGTCGAGGCAGAGATGGCCGATTATTCGACGCGCGCTTTCATCACCGGTCCGAA TGGCGTGGGCATGACTGACCTCGGCACTCTTGGTGGAGCCAGCAGCTTTGTTTCCGGAATCAATGACAGCGGGCAGGTAG TGGGACATTCTGAGACTGCCGCAGGTTCCAGGCATGCTTTTATCACCGGTCCGGATGGCCAGGACATGATCGACCTGGGT ACGCTCGGCGGGAGCTTCAGCAGCGCGGCGGATATCAATGAGGCCGAACAGGTAGTGGGAAGTTCTGAAACCGCAGCAGG TTCCGAGCATGCTTTTATCACTGGTCCGCATGGAACCGGCATGATGGATTTGAACGCGCTGGTGCATCTGCCTGAAGGCG TTATCCTCACCACCGCAACCGGGATCAATAATGTCGGTCAGGTTATAGCGATCGGCACAGTCCCGGAACCCTCATCCTAC GCCCTGATGCTCGCGGGCCTGGCTCTCGTCGGGATAGTGATTCGATGCAGGGAAGTTGTTTAA
Upstream 100 bases:
>100_bases TACTGGCCCAAATGGAGTCGGCATTACCGAGGTGGGTTTTAATCCCCGCGATCTCAACAATTCTGGACAGGTAGTGGGAG GTCTTCAGGTCCCTCAAGAC
Downstream 100 bases:
>100_bases AGCAGCGGCACTTTAAGTAGCAATAGGTCTTGCGGAGAAGCTGGGTCACCCTGAAGGGGAGCGTCAGTTACTTTCAATAC CAGGATCAATGGAAGACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MPLFFHSYITGPNGEGRTPIKSLAKNESDFTVAYGINDAGQVAGGSWTGEGGSNHAFITGPNGVGTIDLDLFGGNHSRAI GINNTAQVAVEAEMADYSTRAFITGPNGVGMTDLGTLGGASSFVSGINDSGQVVGHSETAAGSRHAFITGPDGQDMIDLG TLGGSFSSAADINEAEQVVGSSETAAGSEHAFITGPHGTGMMDLNALVHLPEGVILTTATGINNVGQVIAIGTVPEPSSY ALMLAGLALVGIVIRCREVV
Sequences:
>Translated_260_residues MPLFFHSYITGPNGEGRTPIKSLAKNESDFTVAYGINDAGQVAGGSWTGEGGSNHAFITGPNGVGTIDLDLFGGNHSRAI GINNTAQVAVEAEMADYSTRAFITGPNGVGMTDLGTLGGASSFVSGINDSGQVVGHSETAAGSRHAFITGPDGQDMIDLG TLGGSFSSAADINEAEQVVGSSETAAGSEHAFITGPHGTGMMDLNALVHLPEGVILTTATGINNVGQVIAIGTVPEPSSY ALMLAGLALVGIVIRCREVV >Mature_259_residues PLFFHSYITGPNGEGRTPIKSLAKNESDFTVAYGINDAGQVAGGSWTGEGGSNHAFITGPNGVGTIDLDLFGGNHSRAIG INNTAQVAVEAEMADYSTRAFITGPNGVGMTDLGTLGGASSFVSGINDSGQVVGHSETAAGSRHAFITGPDGQDMIDLGT LGGSFSSAADINEAEQVVGSSETAAGSEHAFITGPHGTGMMDLNALVHLPEGVILTTATGINNVGQVIAIGTVPEPSSYA LMLAGLALVGIVIRCREVV
Specific function: Unknown
COG id: COG5563
COG function: function code S; Predicted integral membrane proteins containing uncharacterized repeats
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26248; Mature: 26117
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLFFHSYITGPNGEGRTPIKSLAKNESDFTVAYGINDAGQVAGGSWTGEGGSNHAFITG CCEEEEEEEECCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEC PNGVGTIDLDLFGGNHSRAIGINNTAQVAVEAEMADYSTRAFITGPNGVGMTDLGTLGGA CCCCEEEEEEEECCCCCEEEECCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCH SSFVSGINDSGQVVGHSETAAGSRHAFITGPDGQDMIDLGTLGGSFSSAADINEAEQVVG HHHHHCCCCCCCEEECCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHC SSETAAGSEHAFITGPHGTGMMDLNALVHLPEGVILTTATGINNVGQVIAIGTVPEPSSY CCCCCCCCCCEEEECCCCCCEEECCEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCH ALMLAGLALVGIVIRCREVV HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PLFFHSYITGPNGEGRTPIKSLAKNESDFTVAYGINDAGQVAGGSWTGEGGSNHAFITG CEEEEEEEECCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEC PNGVGTIDLDLFGGNHSRAIGINNTAQVAVEAEMADYSTRAFITGPNGVGMTDLGTLGGA CCCCEEEEEEEECCCCCEEEECCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCH SSFVSGINDSGQVVGHSETAAGSRHAFITGPDGQDMIDLGTLGGSFSSAADINEAEQVVG HHHHHCCCCCCCEEECCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHC SSETAAGSEHAFITGPHGTGMMDLNALVHLPEGVILTTATGINNVGQVIAIGTVPEPSSY CCCCCCCCCCEEEECCCCCCEEECCEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCH ALMLAGLALVGIVIRCREVV HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA