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The map label for this gene is 82703124

Identifier: 82703124

GI number: 82703124

Start: 2302751

End: 2303434

Strand: Reverse

Name: 82703124

Synonym: Nmul_A2003

Alternate gene names: NA

Gene position: 2303434-2302751 (Counterclockwise)

Preceding gene: 82703125

Following gene: 82703120

Centisome position: 72.34

GC content: 53.22

Gene sequence:

>684_bases
ATGTCACGGGATAGATTAGCTGAGTTGAGCCGGTTAATAGCCGGCCTAGCTGTCTATATCTCATGCACCTGCCTCGCTCA
AGCAGAAATGTTGAGCGGTCGCGTGGTCAAGATCGCCGATGGCGATACCCTGACAGTCCTCGACAAGTCAAACCGGCAGC
ACAAGATCAGACTTTTGGGAATCGATGCGCCTGAACATGCACAGCCGTTTGGCACCGTATCCCGGCAAAACCTGGCTGAT
CTGGTGTTTGGCAAAACAGTTGCCGTGGAGTGGTACAAGCAAGATCGCTATCAGCGTATTTTGGGAAAAGTGCTGCTGAA
TGGGCAGGACGTAAACTTGAAGCAGATCAAGGCCGGGCTGGCATGGCATTACAAACAGTATGACAAAGATCTGCGGCGGG
CTGATAAGCAGCTTTATGCCGAGGCTCAGAAGGCAGCCAGTCTCAAGGGCATTGGACTGTGGAATGATGTGGCGCCTGTC
GCACCGTGGGATTTCCGGCACAATAAGTCTGCCCCATCAGTTGCAGACGATGGATGCGAGATCAGGCTTGGTGAATTCCG
GTACAAGATCGACCCCGTCATTTGTGGAATTTTTCGGAATGCCCTCAAGTCTGCCTCCACCCTGCCCGGACTCATGGAGC
TTGTGCATCTTGCAACTCGTCCTGGCTCACGAGAAGCCAATTGA

Upstream 100 bases:

>100_bases
ATGGCGCTGCCGAAAGCGTCCCAGATTGGGTGCTACAAGCTGCAGGACATCTCGTCCGAGCGCTTCATACAGGCAGTGGC
TAGCATCAAGGTAACGTGTA

Downstream 100 bases:

>100_bases
ATCGATGGCAGCTTATGCAATGCTCTGCGCTAATCAGGATTGCGGCAGAATTTTCGCAATGAGAAAAACCATCCCCTGAT
AAGGCAGGAAAAAACAGGAT

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSRDRLAELSRLIAGLAVYISCTCLAQAEMLSGRVVKIADGDTLTVLDKSNRQHKIRLLGIDAPEHAQPFGTVSRQNLAD
LVFGKTVAVEWYKQDRYQRILGKVLLNGQDVNLKQIKAGLAWHYKQYDKDLRRADKQLYAEAQKAASLKGIGLWNDVAPV
APWDFRHNKSAPSVADDGCEIRLGEFRYKIDPVICGIFRNALKSASTLPGLMELVHLATRPGSREAN

Sequences:

>Translated_227_residues
MSRDRLAELSRLIAGLAVYISCTCLAQAEMLSGRVVKIADGDTLTVLDKSNRQHKIRLLGIDAPEHAQPFGTVSRQNLAD
LVFGKTVAVEWYKQDRYQRILGKVLLNGQDVNLKQIKAGLAWHYKQYDKDLRRADKQLYAEAQKAASLKGIGLWNDVAPV
APWDFRHNKSAPSVADDGCEIRLGEFRYKIDPVICGIFRNALKSASTLPGLMELVHLATRPGSREAN
>Mature_226_residues
SRDRLAELSRLIAGLAVYISCTCLAQAEMLSGRVVKIADGDTLTVLDKSNRQHKIRLLGIDAPEHAQPFGTVSRQNLADL
VFGKTVAVEWYKQDRYQRILGKVLLNGQDVNLKQIKAGLAWHYKQYDKDLRRADKQLYAEAQKAASLKGIGLWNDVAPVA
PWDFRHNKSAPSVADDGCEIRLGEFRYKIDPVICGIFRNALKSASTLPGLMELVHLATRPGSREAN

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 25284; Mature: 25153

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS01123 TNASE_1 ; PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDRLAELSRLIAGLAVYISCTCLAQAEMLSGRVVKIADGDTLTVLDKSNRQHKIRLLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCEEEEEEE
IDAPEHAQPFGTVSRQNLADLVFGKTVAVEWYKQDRYQRILGKVLLNGQDVNLKQIKAGL
CCCCCCCCCCCCCCHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AWHYKQYDKDLRRADKQLYAEAQKAASLKGIGLWNDVAPVAPWDFRHNKSAPSVADDGCE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
IRLGEFRYKIDPVICGIFRNALKSASTLPGLMELVHLATRPGSREAN
EEECCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SRDRLAELSRLIAGLAVYISCTCLAQAEMLSGRVVKIADGDTLTVLDKSNRQHKIRLLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCEEEEEEE
IDAPEHAQPFGTVSRQNLADLVFGKTVAVEWYKQDRYQRILGKVLLNGQDVNLKQIKAGL
CCCCCCCCCCCCCCHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AWHYKQYDKDLRRADKQLYAEAQKAASLKGIGLWNDVAPVAPWDFRHNKSAPSVADDGCE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
IRLGEFRYKIDPVICGIFRNALKSASTLPGLMELVHLATRPGSREAN
EEECCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]