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The map label for this gene is ybeD [C]

Identifier: 82703110

GI number: 82703110

Start: 2286331

End: 2286660

Strand: Reverse

Name: ybeD [C]

Synonym: Nmul_A1989

Alternate gene names: 82703110

Gene position: 2286660-2286331 (Counterclockwise)

Preceding gene: 82703111

Following gene: 82703109

Centisome position: 71.81

GC content: 51.82

Gene sequence:

>330_bases
GTGAAACCCGTGACTTCGTCTGACGATAGCACCCTGATCGAATATCCCTGCGATTTTCCGATTAAAATCATGGGGCGTGT
CGGGTCGCCCTCCGGCATTCCACCCAGTGCCGCAACGCTGGAATACCGGCGGCAGGATTTTTCACAGAACGTACTGGCGA
TTGTGAAGCGCCACGCTCCGGATTTTGACGAGGCGACCATGGAGGTAAGAATCAGCAGAAAAAGCAATTATCTCAGCCTT
ACGTGCACGATTCGCGCTGTTTCTCGTGAACAACTGGATGCGTTATATCAGGAACTGTGCGATCATCCCACAGTGGTAAT
GGTACTTTAG

Upstream 100 bases:

>100_bases
GTGAGGGAAAGCCGGGCAAAATGTTTGCATTGTTTTACCAGCTCTACCAGAGTTATAAACAAACCACCATGCGAGGCAAA
TCTTCGATATCCTGAAGGTC

Downstream 100 bases:

>100_bases
CGAATTTCTGATTCCTTCCGCGATTCATATTCCGGAAGCTTCTCCGTGATACAGCCCGTTAGCCTGGAGTTTGTGCCCGG
TCCTTCAGGACTTGAAGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKPVTSSDDSTLIEYPCDFPIKIMGRVGSPSGIPPSAATLEYRRQDFSQNVLAIVKRHAPDFDEATMEVRISRKSNYLSL
TCTIRAVSREQLDALYQELCDHPTVVMVL

Sequences:

>Translated_109_residues
MKPVTSSDDSTLIEYPCDFPIKIMGRVGSPSGIPPSAATLEYRRQDFSQNVLAIVKRHAPDFDEATMEVRISRKSNYLSL
TCTIRAVSREQLDALYQELCDHPTVVMVL
>Mature_109_residues
MKPVTSSDDSTLIEYPCDFPIKIMGRVGSPSGIPPSAATLEYRRQDFSQNVLAIVKRHAPDFDEATMEVRISRKSNYLSL
TCTIRAVSREQLDALYQELCDHPTVVMVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 12233; Mature: 12233

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVTSSDDSTLIEYPCDFPIKIMGRVGSPSGIPPSAATLEYRRQDFSQNVLAIVKRHAP
CCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCC
DFDEATMEVRISRKSNYLSLTCTIRAVSREQLDALYQELCDHPTVVMVL
CCCCCEEEEEEECCCCEEEEEEEEEECCHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MKPVTSSDDSTLIEYPCDFPIKIMGRVGSPSGIPPSAATLEYRRQDFSQNVLAIVKRHAP
CCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCC
DFDEATMEVRISRKSNYLSLTCTIRAVSREQLDALYQELCDHPTVVMVL
CCCCCEEEEEEECCCCEEEEEEEEEECCHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]