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The map label for this gene is comL [H]

Identifier: 82703096

GI number: 82703096

Start: 2272172

End: 2272972

Strand: Reverse

Name: comL [H]

Synonym: Nmul_A1975

Alternate gene names: 82703096

Gene position: 2272972-2272172 (Counterclockwise)

Preceding gene: 82703107

Following gene: 82703093

Centisome position: 71.38

GC content: 52.81

Gene sequence:

>801_bases
ATGTTACGTAGTGTAGCTTTATTTCTCGCATTGCTGCTATCGGCATGCGGCCTGTTTCCCAAGGAAATGGAGGACACCAA
GGCGTGGTCGGCGAGTAAATACTATACCGAGGCAAAATCGGAATTGAACGATGGCAATTATGCTGCCGCCATCAAACTTT
TTGAAGCGCTGGAAGCGCGCTACCCTTACGGGCGCTATGCGCAGCAGGCGCAGCTGGAAATCGGCTATGCGCATTACAAG
GATGGCGAGCAGGCGCTGGCGATTGCGGCTGCCGATCGTTTCATCAAGCTTCATCCAAACCATCCCAATGTGGATTATGC
GTATTACCTGAAGGGTCTGGCGAATTTCAACGATGACCTGGGGTTGATGGGCATCGTCACGGAAAAGATTCTCAACCAGG
ACATGAGCGAGCGCGATCCCAAGGCATCGCACGAATCATTTGAAAATTTCAAGGAGCTGGTGAACCGTTTTCCCAAGAGC
AAGTACGCGCCCGATGCAGTGCAACGCATGAAGCATCTGGTCAACGTCGTAGCGCTGAATGAAATACAGGTGGCGCGCTA
CTATATGAAACGGGGAGGGTATGTTGCCGCAGCCAACCGCGCCCAATATGCCTTGAAGGAATATCCGCAAACCCCGGCGA
CGGAAGAGGCCTTGTTCATCATGGTGAAGGCCTACGACGCCTTGGGCATGACTGATTTGCGCGATGATGCCGATCGTGTC
ATGAGAAAAAACTTTCCAAACAGCCGTTTTCTATCCGACTCGACGGGGACCAACGGCGAGCCCTGGTGGAAATTCTGGTG
A

Upstream 100 bases:

>100_bases
CACAACCCTCCCCGGCGGCTCGGGCGCCGGATGCGCTGGTTCGGGCACTATAGGCTTTGGGCTATAATGGTTATTCCTTT
TTCCTGGCACTGAATTCATC

Downstream 100 bases:

>100_bases
TGCCAGCAATGCTCCGGCTGAAGCTGTGGAGCGACTGGATTGCAAAACGGAGGCCAGACTAGGACGCCAAGGGATCGAGC
GCTGATCTCTCCAGTATCGA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MLRSVALFLALLLSACGLFPKEMEDTKAWSASKYYTEAKSELNDGNYAAAIKLFEALEARYPYGRYAQQAQLEIGYAHYK
DGEQALAIAAADRFIKLHPNHPNVDYAYYLKGLANFNDDLGLMGIVTEKILNQDMSERDPKASHESFENFKELVNRFPKS
KYAPDAVQRMKHLVNVVALNEIQVARYYMKRGGYVAAANRAQYALKEYPQTPATEEALFIMVKAYDALGMTDLRDDADRV
MRKNFPNSRFLSDSTGTNGEPWWKFW

Sequences:

>Translated_266_residues
MLRSVALFLALLLSACGLFPKEMEDTKAWSASKYYTEAKSELNDGNYAAAIKLFEALEARYPYGRYAQQAQLEIGYAHYK
DGEQALAIAAADRFIKLHPNHPNVDYAYYLKGLANFNDDLGLMGIVTEKILNQDMSERDPKASHESFENFKELVNRFPKS
KYAPDAVQRMKHLVNVVALNEIQVARYYMKRGGYVAAANRAQYALKEYPQTPATEEALFIMVKAYDALGMTDLRDDADRV
MRKNFPNSRFLSDSTGTNGEPWWKFW
>Mature_266_residues
MLRSVALFLALLLSACGLFPKEMEDTKAWSASKYYTEAKSELNDGNYAAAIKLFEALEARYPYGRYAQQAQLEIGYAHYK
DGEQALAIAAADRFIKLHPNHPNVDYAYYLKGLANFNDDLGLMGIVTEKILNQDMSERDPKASHESFENFKELVNRFPKS
KYAPDAVQRMKHLVNVVALNEIQVARYYMKRGGYVAAANRAQYALKEYPQTPATEEALFIMVKAYDALGMTDLRDDADRV
MRKNFPNSRFLSDSTGTNGEPWWKFW

Specific function: Required for efficient transformation of Neisseria gonorrhoeae by species-related DNA [H]

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=244, Percent_Identity=39.344262295082, Blast_Score=176, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30348; Mature: 30348

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSVALFLALLLSACGLFPKEMEDTKAWSASKYYTEAKSELNDGNYAAAIKLFEALEAR
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
YPYGRYAQQAQLEIGYAHYKDGEQALAIAAADRFIKLHPNHPNVDYAYYLKGLANFNDDL
CCCCHHHHHHHEEECHHCCCCCCHHHHHEECCCEEEECCCCCCCHHHHHHHHHHCCCCCC
GLMGIVTEKILNQDMSERDPKASHESFENFKELVNRFPKSKYAPDAVQRMKHLVNVVALN
HHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EIQVARYYMKRGGYVAAANRAQYALKEYPQTPATEEALFIMVKAYDALGMTDLRDDADRV
HHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCCHHHEEEEEHHHHCCCCHHHHHHHHH
MRKNFPNSRFLSDSTGTNGEPWWKFW
HHHCCCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRSVALFLALLLSACGLFPKEMEDTKAWSASKYYTEAKSELNDGNYAAAIKLFEALEAR
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
YPYGRYAQQAQLEIGYAHYKDGEQALAIAAADRFIKLHPNHPNVDYAYYLKGLANFNDDL
CCCCHHHHHHHEEECHHCCCCCCHHHHHEECCCEEEECCCCCCCHHHHHHHHHHCCCCCC
GLMGIVTEKILNQDMSERDPKASHESFENFKELVNRFPKSKYAPDAVQRMKHLVNVVALN
HHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EIQVARYYMKRGGYVAAANRAQYALKEYPQTPATEEALFIMVKAYDALGMTDLRDDADRV
HHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCCHHHEEEEEHHHHCCCCHHHHHHHHH
MRKNFPNSRFLSDSTGTNGEPWWKFW
HHHCCCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8830266 [H]