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The map label for this gene is yjdC [C]

Identifier: 82703053

GI number: 82703053

Start: 2222910

End: 2223542

Strand: Direct

Name: yjdC [C]

Synonym: Nmul_A1932

Alternate gene names: 82703053

Gene position: 2222910-2223542 (Clockwise)

Preceding gene: 82703052

Following gene: 82703054

Centisome position: 69.81

GC content: 55.13

Gene sequence:

>633_bases
ATGAAGGAAGCTCGCAAATCGATCGAGGAAAAACTGCTTTTGGCCGCGCGCCGCCTGTTCTGCCGTGCCGGGATCCATGC
GACAGGCGTTACGCGGATTCTCGAGGAAGCGGGTGTGGCACGCGCCAGCCTCTATACCCACTACGGCTCAAAGGAAAATC
TGCTCAAGGCGGTGTTCGATACGGAAGCGAACATGTGGTTTCACTGGTTCGACCTGGACCTGCCACATCTCAAGTGTTCC
CCCCGGGAGCGCATCCTGGCCCTGTTCGATCTGCTGGAGAAATGGTTCGCAAAAGAAGACTTCTTTGGCTGCGTATTCAT
CAATGCCGTAGCGGAACACGAAAAGGATAGCCGCTGGGTAAAGGATATAGCCAGTGCGTACCGGGATCAAATAATTGACC
GGCTGAGGTCACTGGTTGTGGAAAGCGGAGCCAAGGATCCCGATATGCTCACTCAGAAACTGGGCCTGATCATCGAAGGT
GCGATCGTAACCGCTATGGTCACTCAAAATAGCCAGCCCGCCTATATCGCACGGCTTGCCGCTGAGGACATTCTACGCTG
TATGGAGTATACCCTCTCTCCAGCGGAGAATTCTGCATCATCCGCTGCGCCTGCCTCCATGGAACCGGTTTAG

Upstream 100 bases:

>100_bases
GGCAGGATCGCGAGAAAAATCAGGAAACAATTAGCAGAGGGGAGCGTCCCGGGCCGAGCAAAACCCCATCAATCCATGCA
GATCCTGGAGGAATAGGCCG

Downstream 100 bases:

>100_bases
TCGAATTACGGGAGAAGTCAATGGATAGCATTTGGGCAAATTTATCGACAGGGATGCGGCGTTTTCTGGCTCTGATCGGA
TCTCTCGCGGTTATCGTGGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory Protein; Transcriptional Regulator Protein; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; Regulatory Protein; TetR-Family Transcriptional Regulator; Tetr Family Transcriptional Regulator; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Transcriptional Regulator Of TetR Family Protein; Transcription Regulator TetR; Methionine And Cysteine Biosynthesis Regulator; TetR/AcrR Family Transcriptional Regulator; TetR/AcrR-Family Trancriptional Regulatory Protein

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKEARKSIEEKLLLAARRLFCRAGIHATGVTRILEEAGVARASLYTHYGSKENLLKAVFDTEANMWFHWFDLDLPHLKCS
PRERILALFDLLEKWFAKEDFFGCVFINAVAEHEKDSRWVKDIASAYRDQIIDRLRSLVVESGAKDPDMLTQKLGLIIEG
AIVTAMVTQNSQPAYIARLAAEDILRCMEYTLSPAENSASSAAPASMEPV

Sequences:

>Translated_210_residues
MKEARKSIEEKLLLAARRLFCRAGIHATGVTRILEEAGVARASLYTHYGSKENLLKAVFDTEANMWFHWFDLDLPHLKCS
PRERILALFDLLEKWFAKEDFFGCVFINAVAEHEKDSRWVKDIASAYRDQIIDRLRSLVVESGAKDPDMLTQKLGLIIEG
AIVTAMVTQNSQPAYIARLAAEDILRCMEYTLSPAENSASSAAPASMEPV
>Mature_210_residues
MKEARKSIEEKLLLAARRLFCRAGIHATGVTRILEEAGVARASLYTHYGSKENLLKAVFDTEANMWFHWFDLDLPHLKCS
PRERILALFDLLEKWFAKEDFFGCVFINAVAEHEKDSRWVKDIASAYRDQIIDRLRSLVVESGAKDPDMLTQKLGLIIEG
AIVTAMVTQNSQPAYIARLAAEDILRCMEYTLSPAENSASSAAPASMEPV

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23620; Mature: 23620

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEARKSIEEKLLLAARRLFCRAGIHATGVTRILEEAGVARASLYTHYGSKENLLKAVFD
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHH
TEANMWFHWFDLDLPHLKCSPRERILALFDLLEKWFAKEDFFGCVFINAVAEHEKDSRWV
CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH
KDIASAYRDQIIDRLRSLVVESGAKDPDMLTQKLGLIIEGAIVTAMVTQNSQPAYIARLA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AEDILRCMEYTLSPAENSASSAAPASMEPV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKEARKSIEEKLLLAARRLFCRAGIHATGVTRILEEAGVARASLYTHYGSKENLLKAVFD
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHH
TEANMWFHWFDLDLPHLKCSPRERILALFDLLEKWFAKEDFFGCVFINAVAEHEKDSRWV
CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH
KDIASAYRDQIIDRLRSLVVESGAKDPDMLTQKLGLIIEGAIVTAMVTQNSQPAYIARLA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AEDILRCMEYTLSPAENSASSAAPASMEPV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA