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The map label for this gene is ybaV [C]

Identifier: 82702894

GI number: 82702894

Start: 2024494

End: 2024793

Strand: Reverse

Name: ybaV [C]

Synonym: Nmul_A1771

Alternate gene names: 82702894

Gene position: 2024793-2024494 (Counterclockwise)

Preceding gene: 82702895

Following gene: 82702893

Centisome position: 63.59

GC content: 53.67

Gene sequence:

>300_bases
ATGGGCAAACTGCTCATCATTATTTCAGCTCCGCTGATCTTCGCAGGCAGTGTTCATGCTGCTGTCAATATCAATACCGC
TACCCAGCAAGAGCTCCAGACCTTGAATGGTATTACTTCCGCCAAAGCCCGGGCGATCATCGAATACCGGTCGAAGGCGG
GCAAATTCAGGACGGCGGAGGACCTGACAAAGGTAGACGGCATCAATCCCCGCTATCTGGATATGAAGCAGCTCTACAAG
GATGTTTCAGTCGCCGGACCGACCGTTCTGAAGGTGGGGGCAAAGCCGGCGGGTAAGTAA

Upstream 100 bases:

>100_bases
TTAAACCTGCCTCCTGCCAGATCGGGGGTGTTGAAAAAATTCGGGCGGTTTGCCCGAATGTCGTGCAACCGCAATTCATT
CATACAAAGAGGAGAAAACC

Downstream 100 bases:

>100_bases
TGATGCCGCAATATTAGAGCGCGATAATGCGATAGATAATGGAGGTGGTAGGAAGGACAGGCAGCAGGGCATGGCGGTTT
CCAGAAATGCATAACCTGCC

Product: competence protein ComEA helix-hairpin-helix region

Products: NA

Alternate protein names: Competence Protein ComEA Helix-Hairpin-Helix Region; DNA Transport Competence Protein; Acetohydroxy Acid Synthase Large Subunit; ComE Operon -Related Protein

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MGKLLIIISAPLIFAGSVHAAVNINTATQQELQTLNGITSAKARAIIEYRSKAGKFRTAEDLTKVDGINPRYLDMKQLYK
DVSVAGPTVLKVGAKPAGK

Sequences:

>Translated_99_residues
MGKLLIIISAPLIFAGSVHAAVNINTATQQELQTLNGITSAKARAIIEYRSKAGKFRTAEDLTKVDGINPRYLDMKQLYK
DVSVAGPTVLKVGAKPAGK
>Mature_98_residues
GKLLIIISAPLIFAGSVHAAVNINTATQQELQTLNGITSAKARAIIEYRSKAGKFRTAEDLTKVDGINPRYLDMKQLYKD
VSVAGPTVLKVGAKPAGK

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10568; Mature: 10436

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLLIIISAPLIFAGSVHAAVNINTATQQELQTLNGITSAKARAIIEYRSKAGKFRTAE
CCCEEEEEECCCHHCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHH
DLTKVDGINPRYLDMKQLYKDVSVAGPTVLKVGAKPAGK
HHHHHCCCCCCEECHHHHHHHHCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
GKLLIIISAPLIFAGSVHAAVNINTATQQELQTLNGITSAKARAIIEYRSKAGKFRTAE
CCEEEEEECCCHHCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHH
DLTKVDGINPRYLDMKQLYKDVSVAGPTVLKVGAKPAGK
HHHHHCCCCCCEECHHHHHHHHCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA