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The map label for this gene is cc4 [H]

Identifier: 82702844

GI number: 82702844

Start: 1963005

End: 1963658

Strand: Reverse

Name: cc4 [H]

Synonym: Nmul_A1720

Alternate gene names: 82702844

Gene position: 1963658-1963005 (Counterclockwise)

Preceding gene: 82702847

Following gene: 82702843

Centisome position: 61.67

GC content: 57.34

Gene sequence:

>654_bases
ATGCCGGTGACCGTGCCGGATACGATGGCTGAGCGGGTCAAGCCCTGCACAGTGTGTCATGGCCAGGCAGACAGGGTGGG
CAGGGATGCCTATTACCCTCGAATTGCAGGTAAGCCGGAGGGATATCTTTTCAATCAGTTGCGGGATTTCCGAGACGGAC
GCCGCTATTACCGGCCAATGACATTACTGTTGGCGAACGTGAGCGATGAATACCTGCGGGAAATGGCAGCGTATTTTTCA
GCACTCAGACAACCTTACCCTCCGCCGGAACAGGTGATATCTTCTCCCACTGAAATAAGACAGGCCCAGCAGCTGATTCA
GCAGGGGGATGCCACGCGGGATATACCCGCGTGCATTGAATGCCACGGCAAGCAGCTCATGGGCACCGCGCCTTTTATTC
CGGGACTCCTGGGGCTTCCGCGCATCTATATCGCCGCCCAATTCGGTGCCTGGAAGAACGGTGGAGTGATGAGAGGACAA
GCGAGTAACTGCATGTCCGATATCGCCAGACAACTCACGATCAAGGAGACGAATGTCGTAGCGGCGTGGCTTGCCGCTCA
GCCTGTGCCTGAAAATGCAGGTCCGGCAAATGTGCTGTCCCCGGAGATGGCGCAGCGCTGCGGAAGTATTGTCCAGGGGA
GCGCAGACCGATGA

Upstream 100 bases:

>100_bases
ATTTATTTCACTTCTATTCATTGCTGCTGCCGTATCAGGTGTATCAAGTGCCCTGGCTGCCGCCTCGGACGGAATCGCAT
CGAGCAGGACTACACCGGTC

Downstream 100 bases:

>100_bases
AAATTGCTGTCATCGCTGCCGCAGTGGCAGTTCTTGCGGGTATCGGCCTATCTCCTGAAATAGTTGGCGCACCTTCTCCG
AAAAAGGAAGCAAAGGCAGA

Product: cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MPVTVPDTMAERVKPCTVCHGQADRVGRDAYYPRIAGKPEGYLFNQLRDFRDGRRYYRPMTLLLANVSDEYLREMAAYFS
ALRQPYPPPEQVISSPTEIRQAQQLIQQGDATRDIPACIECHGKQLMGTAPFIPGLLGLPRIYIAAQFGAWKNGGVMRGQ
ASNCMSDIARQLTIKETNVVAAWLAAQPVPENAGPANVLSPEMAQRCGSIVQGSADR

Sequences:

>Translated_217_residues
MPVTVPDTMAERVKPCTVCHGQADRVGRDAYYPRIAGKPEGYLFNQLRDFRDGRRYYRPMTLLLANVSDEYLREMAAYFS
ALRQPYPPPEQVISSPTEIRQAQQLIQQGDATRDIPACIECHGKQLMGTAPFIPGLLGLPRIYIAAQFGAWKNGGVMRGQ
ASNCMSDIARQLTIKETNVVAAWLAAQPVPENAGPANVLSPEMAQRCGSIVQGSADR
>Mature_216_residues
PVTVPDTMAERVKPCTVCHGQADRVGRDAYYPRIAGKPEGYLFNQLRDFRDGRRYYRPMTLLLANVSDEYLREMAAYFSA
LRQPYPPPEQVISSPTEIRQAQQLIQQGDATRDIPACIECHGKQLMGTAPFIPGLLGLPRIYIAAQFGAWKNGGVMRGQA
SNCMSDIARQLTIKETNVVAAWLAAQPVPENAGPANVLSPEMAQRCGSIVQGSADR

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 23911; Mature: 23780

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVTVPDTMAERVKPCTVCHGQADRVGRDAYYPRIAGKPEGYLFNQLRDFRDGRRYYRPM
CCCCCCHHHHHHCCCHHHCCCCHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TLLLANVSDEYLREMAAYFSALRQPYPPPEQVISSPTEIRQAQQLIQQGDATRDIPACIE
HHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHH
CHGKQLMGTAPFIPGLLGLPRIYIAAQFGAWKNGGVMRGQASNCMSDIARQLTIKETNVV
HCCHHHCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AAWLAAQPVPENAGPANVLSPEMAQRCGSIVQGSADR
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PVTVPDTMAERVKPCTVCHGQADRVGRDAYYPRIAGKPEGYLFNQLRDFRDGRRYYRPM
CCCCCHHHHHHCCCHHHCCCCHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TLLLANVSDEYLREMAAYFSALRQPYPPPEQVISSPTEIRQAQQLIQQGDATRDIPACIE
HHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHH
CHGKQLMGTAPFIPGLLGLPRIYIAAQFGAWKNGGVMRGQASNCMSDIARQLTIKETNVV
HCCHHHCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AAWLAAQPVPENAGPANVLSPEMAQRCGSIVQGSADR
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]