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The map label for this gene is frvR [H]

Identifier: 82546245

GI number: 82546245

Start: 3941147

End: 3942895

Strand: Reverse

Name: frvR [H]

Synonym: SBO_3913

Alternate gene names: 82546245

Gene position: 3942895-3941147 (Counterclockwise)

Preceding gene: 82546246

Following gene: 82546243

Centisome position: 87.24

GC content: 49.63

Gene sequence:

>1749_bases
ATGCTAAACGAACGCCAGTTAAAGATTGTCGATCTGCTGGAGCAACAGCCGCGCACGCCTGGTGAGCTGGCGCAACAGAC
TGGCGTTTCAGGCAGGACCATCCTGCGTGATATTGACTATCTCAACTTTACCCTTAACGGCAAAGCCCGCATTTCCGCCA
GTGGTAGTGCGGGCTATCAGCTGGAAATCTTCGAGCGCCGCAGCTTTTTTCAGTTGCTGCAAAAGCACGATAACGACTAT
CGGCTGCTGGCACTGTTATTACTGAATACCTTTACTCCCCGTGCGCAACTCGCCTCGGCGCTTAATTTGCCAGAAACGTG
GGTCGCAGAGCGTCTGCCCCGGTTAAAACAGCGTTATGAACGCGCTTGTTGCCTGGCCAGCCGCCCCGGTTTGGGCCATT
TCATTGATGAGACAGAAGAGAAGCGCGTTATCTTGCTGGCGAACTTGCTGCGCAAAGATCCGTTTTTAATTCCGCTGGCG
GGCGTAACACGAGACAACCTTCAGCATTTATCCACGGCCTGCGACAACCAACACCGCTGGCCGCTCATGCAGGGTGATTA
TCTCTCCAGCCTGATTCTGGCGATTTACGCCCTGCGTAATCAACTGACCGATGAGTGGCCGCAATATCCCGGTGACGAGA
TAAAACAAATCGTTGAACAAAGCGGCATGTTTCTTGGTGATAACGCTGTAAGAACCCTGACAGGTTTGATAGAGAAACAG
CATCAGCAAGCGCAGGTAATTTCAGCCGATCATGTGCTGGGGTTGCTGCAAAGGGTGCCAGACATCGCGTCATTGAATAT
TATTGATACGCAGTTGGTTGAGAATATTACCGGGCATTTATTACGTTGCCTTGCCGCACCGGTGTGGATTGCTGAGCACC
GCCAAAGTAGCATGAATAACCTGAAAGCAGCCTGGCCTGCGGCCTTTGATATGAGTCTGCACTTTATTACGCTACTGCGT
GAACAGCTCGATATTCCCCTTTTCGACAACGATCTGATCGGTTTGTATTTTGCCTGTGCGCTGGAGCGGCATCAAAACGA
ACGCCAGCCGATCATTTTGCTCTCGGACCAGAACGCGATTGCCACTATTAATCAGCTCGCCATTGAGCGCGATGTTTTAA
ATTGTCGGGTAATTATTGCCCGTAGCTTAAGCGAACTTGTTGCCATTCGCGAAGAGATTGAGCCGTTATTGATCATTAAC
AATAGCCATTATTTACTGGAAGACGCGGTAAATAATTACATCACCGTAAAAAATATCATTACGGCTGCCGGTATCGAACA
AATAAAACATTTTCTGGCGACGGCATTTATTCGCCAGCAACCGGAGCGTTTTTTCTCTGCCCCCGGAAGTTTTCATTATT
CGAATGTACGCGGTGAAAGCTGGCAACATATTACCCGGCAAATTTGTGCGCAATTAGTCGCACAACACCATATTACCGCC
GATGAAGCACAACGCATCATCGCCCGCGAAGGCGAAGGTGAAAACCTGATTGTTAATCGCCTCGCCATCCCACATTGCTG
GAGCGAACAGGAGCGACGTTTTCGTGGATTTTTTATTACCCTCGCCCAACCAGTTGAGGTGAATAACGAAGTCATTAACC
ATGTCTTGATCGCCTGCGCCGCCGCCGATGCGCGTCATGAGCTAAAAATATTTAGCTATCTGGCAAGCATATTGTGTCAG
CATCCGGCAGAGGTTATTGCCGGGTTAACAGGATATGAGGCATTTATGGAGTTACTTCACAAGGGGTGA

Upstream 100 bases:

>100_bases
AAGCCGATTACGATGCTCTGCTCACGTTGATACGGGATTTTCTGACCACCTTAACCGCGGAGAAAGTCAACGCGTTTAGC
CAGTTCCGTCAGATGGATTA

Downstream 100 bases:

>100_bases
ACTGTGTCAGATGCGCCGCATCCGACACTGCATTTATCATCAAAAACGTTTAACGCAGGCTATTATAGTCATCAACCATT
TCGTTGTACTCGCGTAATGC

Product: frv operon regulatory protein

Products: NA

Alternate protein names: Putative phosphotransferase EIIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARISASGSAGYQLEIFERRSFFQLLQKHDNDY
RLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERACCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA
GVTRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEQSGMFLGDNAVRTLTGLIEKQ
HQQAQVISADHVLGLLQRVPDIASLNIIDTQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR
EQLDIPLFDNDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIIN
NSHYLLEDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA
DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQ
HPAEVIAGLTGYEAFMELLHKG

Sequences:

>Translated_582_residues
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARISASGSAGYQLEIFERRSFFQLLQKHDNDY
RLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERACCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA
GVTRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEQSGMFLGDNAVRTLTGLIEKQ
HQQAQVISADHVLGLLQRVPDIASLNIIDTQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR
EQLDIPLFDNDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIIN
NSHYLLEDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA
DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQ
HPAEVIAGLTGYEAFMELLHKG
>Mature_582_residues
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARISASGSAGYQLEIFERRSFFQLLQKHDNDY
RLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERACCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA
GVTRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEQSGMFLGDNAVRTLTGLIEKQ
HQQAQVISADHVLGLLQRVPDIASLNIIDTQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLR
EQLDIPLFDNDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIIN
NSHYLLEDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA
DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQ
HPAEVIAGLTGYEAFMELLHKG

Specific function: Could be involved in the regulation of the transcription of the FRV operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIA type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1790331, Length=582, Percent_Identity=97.766323024055, Blast_Score=1150, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF00359 PTS_EIIA_2 [H]

EC number: NA

Molecular weight: Translated: 66077; Mature: 66077

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS51094 PTS_EIIA_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARISASGSAGYQ
CCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCEEEEEECCCEEEEECCCCCCE
LEIFERRSFFQLLQKHDNDYRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE
EEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
RACCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGVTRDNLQHLSTACDNQHRW
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCC
PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEQSGMFLGDNAVRTLTGLIEKQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCHHHHHHHHHHHHH
HQQAQVISADHVLGLLQRVPDIASLNIIDTQLVENITGHLLRCLAAPVWIAEHRQSSMNN
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKAAWPAAFDMSLHFITLLREQLDIPLFDNDLIGLYFACALERHQNERQPIILLSDQNAI
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHH
ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLEDAVNNYITVKNII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCEEEHHHHH
TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA
HHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCH
DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA
HHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHH
AADARHELKIFSYLASILCQHPAEVIAGLTGYEAFMELLHKG
HHCCHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARISASGSAGYQ
CCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCEEEEEECCCEEEEECCCCCCE
LEIFERRSFFQLLQKHDNDYRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE
EEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
RACCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGVTRDNLQHLSTACDNQHRW
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCC
PLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEQSGMFLGDNAVRTLTGLIEKQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCHHHHHHHHHHHHH
HQQAQVISADHVLGLLQRVPDIASLNIIDTQLVENITGHLLRCLAAPVWIAEHRQSSMNN
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKAAWPAAFDMSLHFITLLREQLDIPLFDNDLIGLYFACALERHQNERQPIILLSDQNAI
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHH
ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLEDAVNNYITVKNII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCEEEHHHHH
TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA
HHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCH
DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACA
HHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHH
AADARHELKIFSYLASILCQHPAEVIAGLTGYEAFMELLHKG
HHCCHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503; 8019415 [H]