| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is rhlB [H]
Identifier: 82546134
GI number: 82546134
Start: 3813851
End: 3815116
Strand: Reverse
Name: rhlB [H]
Synonym: SBO_3790
Alternate gene names: 82546134
Gene position: 3815116-3813851 (Counterclockwise)
Preceding gene: 82546153
Following gene: 82546133
Centisome position: 84.41
GC content: 52.21
Gene sequence:
>1266_bases ATGAGCAAAACACATTTAACAGAACAGAAGTTTTCCGACTTCGCCCTGCATCCGAAGGTTGTAGAAGTCCTTGAAAAAAA AGGGTTTCATAACTGTACGCCCATTCAGGCACTGGCCCTTCCGCTGACGCTGGCGGGTCGTGACGTAGCCGGGCAGGCGC AAACCGGTACCGGGAAAACGATGGCGTTTCTTACGTCAACGTTTCATTATCTTCTCTCTCATCCTGCGATTGCCGATCGC AAGGTGAATCAACCACGTGCCTTAATTATGGCACCGACGCGTGAACTTGCCGTGCAGATCCATGCCGACGCAGAACCGCT GGCGGAAGCTACCGGCCTGAAGCTGGGTCTGGCTTACGGTGGTGATGGCTACGACAAACAGCTGAAAGTGCTGGAAAGCG GCGTTGACATTCTGATTGGCACTACGGGGCGTTTAATTGACTACGCCAAGCAGAACCACATTAACCTCGGTGCCATTCAG GTGGTGGTACTGGACGAAGCCGATCGCATGTACGATCTGGGCTTTATTAAAGATATCCGCTGGCTGTTCCGCCGTATGCC GCCTGCAAACCAGCGCCTCAACATGCTGTTCTCCGCCACGCTTTCGTACCGGGTACGTGAACTGGCGTTCGAGCAGATGA ACAATGCCGAATATATTGAAGTGGAACCGGAACAGAAAACGGGCCACCGTATTAAAGAAGAGCTTTTCTACCCTTCTAAC GAAGAAAAAATGCGTTTGCTGCAAACGCTGATCGAAGAAGAGTGGCCAGACAGAGCGATTATTTTCGCCAATACCAAACA CCGTTGTGAAGAGATCTGGGGCCACCTGGCGGCAGATGGTCATCGTGTCGGTTTGTTGACAGGCGATGTCGCGCAGAAAA AACGTCTGCGTATTCTTGATGAATTTACCCGTGGCGATCTGGATATTCTGGTTGCCACCGACGTTGCCGCGCGTGGTTTG CATATTCCGGCAGTGACGCACGTCTTTAACTACGATTTACCCGATGACTGTGAAGATTACGTTCACCGTATTGGTCGTAC AGGTCGCGCAGGCGCAAGCGGTCACTCTATCAGCCTGGCGTGTGAAGAGTATGCATTGAATTTGCCTGCTATTGAGACCT ATATTGGTCACTCAATTCCGGTAAGCAAATACAATCCGGACGCATTGATGACCGATCTGCCAAAACCGCTGCGCCTCACG CGCCCACGTACAGGCAATGGTCCGCGTCGTACTGGCGCTCCGCGTAATCGTCGTCGTTCAGGTTAA
Upstream 100 bases:
>100_bases TTGGTTTCGTTGTTGGTGTAACATTAACCAACTAAAGGTTGACTTTATTTCACCGGATACGCTTTCGTAAAGCAATAGTA AGCTGATATTCTACCACACT
Downstream 100 bases:
>100_bases ATAAAATGTCATACTCAAAATCATTCAAACTGTATCAAGATGGCAAGAGAATGAATCCCGATGAGCATACTGTAGTAAGT GATTCAGGTGAAAGAATGCA
Product: ATP-dependent RNA helicase RhlB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MSKTHLTEQKFSDFALHPKVVEVLEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADR KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ VVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGL HIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT RPRTGNGPRRTGAPRNRRRSG
Sequences:
>Translated_421_residues MSKTHLTEQKFSDFALHPKVVEVLEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADR KVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ VVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGL HIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT RPRTGNGPRRTGAPRNRRRSG >Mature_420_residues SKTHLTEQKFSDFALHPKVVEVLEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRK VNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQV VVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNE EKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLH IPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTR PRTGNGPRRTGAPRNRRRSG
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI222352149, Length=351, Percent_Identity=38.4615384615385, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI41327771, Length=410, Percent_Identity=35.3658536585366, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI148613856, Length=355, Percent_Identity=39.4366197183099, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI38201710, Length=355, Percent_Identity=39.4366197183099, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI45446747, Length=358, Percent_Identity=35.4748603351955, Blast_Score=221, Evalue=8e-58, Organism=Homo sapiens, GI45446743, Length=358, Percent_Identity=35.4748603351955, Blast_Score=221, Evalue=8e-58, Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=37.3937677053824, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI21071032, Length=374, Percent_Identity=35.2941176470588, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI224593278, Length=357, Percent_Identity=36.4145658263305, Blast_Score=212, Evalue=5e-55, Organism=Homo sapiens, GI262118318, Length=341, Percent_Identity=35.4838709677419, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI55749865, Length=356, Percent_Identity=34.8314606741573, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=35.5978260869565, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=35.5978260869565, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=35.5978260869565, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI216548263, Length=342, Percent_Identity=35.9649122807018, Blast_Score=209, Evalue=6e-54, Organism=Homo sapiens, GI262231852, Length=342, Percent_Identity=35.9649122807018, Blast_Score=208, Evalue=6e-54, Organism=Homo sapiens, GI13518015, Length=355, Percent_Identity=35.2112676056338, Blast_Score=208, Evalue=6e-54, Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=34.9593495934959, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=34.9593495934959, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI7661920, Length=370, Percent_Identity=34.5945945945946, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI164419743, Length=377, Percent_Identity=33.1564986737401, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI51094101, Length=377, Percent_Identity=33.1564986737401, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI20149629, Length=383, Percent_Identity=32.8981723237598, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI41327773, Length=381, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI50659095, Length=379, Percent_Identity=33.509234828496, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI13129006, Length=374, Percent_Identity=33.1550802139037, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI164664518, Length=371, Percent_Identity=29.6495956873315, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI13514831, Length=396, Percent_Identity=30.3030303030303, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI8922886, Length=371, Percent_Identity=32.6145552560647, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI6005743, Length=371, Percent_Identity=32.6145552560647, Blast_Score=171, Evalue=9e-43, Organism=Homo sapiens, GI38569503, Length=385, Percent_Identity=29.6103896103896, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI38569505, Length=385, Percent_Identity=29.3506493506493, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI4758112, Length=357, Percent_Identity=31.6526610644258, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI18375623, Length=357, Percent_Identity=31.6526610644258, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=31.2849162011173, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI62241022, Length=352, Percent_Identity=33.5227272727273, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI41327776, Length=382, Percent_Identity=30.8900523560209, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI41327779, Length=420, Percent_Identity=32.1428571428571, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI31542656, Length=376, Percent_Identity=33.2446808510638, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI188035877, Length=349, Percent_Identity=31.8051575931232, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI256223453, Length=367, Percent_Identity=29.4277929155313, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI4503529, Length=371, Percent_Identity=33.1536388140162, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI83700235, Length=371, Percent_Identity=33.4231805929919, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI38327634, Length=347, Percent_Identity=30.2593659942363, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI62241024, Length=369, Percent_Identity=31.4363143631436, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI17505907, Length=411, Percent_Identity=29.4403892944039, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI164419732, Length=367, Percent_Identity=30.7901907356948, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI256773275, Length=394, Percent_Identity=28.1725888324873, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI9966805, Length=315, Percent_Identity=32.3809523809524, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI9506931, Length=408, Percent_Identity=24.7549019607843, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=31.3609467455621, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI154759257, Length=413, Percent_Identity=27.6029055690073, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=33.1818181818182, Blast_Score=111, Evalue=1e-24, Organism=Escherichia coli, GI1790214, Length=421, Percent_Identity=99.7624703087886, Blast_Score=868, Evalue=0.0, Organism=Escherichia coli, GI1787016, Length=381, Percent_Identity=38.8451443569554, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI87082221, Length=377, Percent_Identity=37.6657824933687, Blast_Score=235, Evalue=4e-63, Organism=Escherichia coli, GI1788930, Length=365, Percent_Identity=38.0821917808219, Blast_Score=216, Evalue=2e-57, Organism=Escherichia coli, GI1787605, Length=351, Percent_Identity=36.7521367521368, Blast_Score=201, Evalue=9e-53, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=38.8429752066116, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=38.5674931129477, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=38.5674931129477, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=38.0165289256198, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI86570094, Length=359, Percent_Identity=35.933147632312, Blast_Score=207, Evalue=6e-54, Organism=Caenorhabditis elegans, GI32565321, Length=400, Percent_Identity=32.25, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17555296, Length=387, Percent_Identity=33.0749354005168, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17552642, Length=415, Percent_Identity=33.9759036144578, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=33.7837837837838, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI115533224, Length=355, Percent_Identity=35.2112676056338, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17507121, Length=370, Percent_Identity=33.7837837837838, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI71987143, Length=369, Percent_Identity=34.1463414634146, Blast_Score=194, Evalue=7e-50, Organism=Caenorhabditis elegans, GI17510559, Length=383, Percent_Identity=31.5926892950392, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI17507945, Length=361, Percent_Identity=34.0720221606648, Blast_Score=191, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17537549, Length=406, Percent_Identity=33.0049261083744, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17507877, Length=378, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17509811, Length=408, Percent_Identity=31.6176470588235, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI71999646, Length=380, Percent_Identity=30.5263157894737, Blast_Score=181, Evalue=8e-46, Organism=Caenorhabditis elegans, GI71999644, Length=371, Percent_Identity=30.9973045822102, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17507879, Length=380, Percent_Identity=32.6315789473684, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17507881, Length=376, Percent_Identity=32.4468085106383, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI115532548, Length=396, Percent_Identity=30.3030303030303, Blast_Score=171, Evalue=5e-43, Organism=Caenorhabditis elegans, GI115532546, Length=411, Percent_Identity=29.683698296837, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI193208216, Length=364, Percent_Identity=32.6923076923077, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=31.0924369747899, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI71990816, Length=373, Percent_Identity=33.2439678284182, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17552114, Length=363, Percent_Identity=29.4765840220386, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17536099, Length=384, Percent_Identity=32.5520833333333, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17536101, Length=384, Percent_Identity=32.5520833333333, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17505370, Length=364, Percent_Identity=31.8681318681319, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17536103, Length=384, Percent_Identity=32.5520833333333, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI193206561, Length=407, Percent_Identity=28.992628992629, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=27.0341207349081, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17507641, Length=388, Percent_Identity=29.639175257732, Blast_Score=144, Evalue=7e-35, Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=29.4117647058824, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17556951, Length=362, Percent_Identity=28.7292817679558, Blast_Score=127, Evalue=8e-30, Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=23.3009708737864, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=27.887323943662, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71997889, Length=374, Percent_Identity=27.0053475935829, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=26.0606060606061, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71982862, Length=217, Percent_Identity=30.4147465437788, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=44.5652173913043, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324217, Length=364, Percent_Identity=37.6373626373626, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6324778, Length=424, Percent_Identity=35.1415094339623, Blast_Score=229, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6325138, Length=359, Percent_Identity=37.6044568245125, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6321360, Length=343, Percent_Identity=38.1924198250729, Blast_Score=213, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6323021, Length=364, Percent_Identity=33.7912087912088, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6321856, Length=386, Percent_Identity=34.7150259067358, Blast_Score=197, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6320041, Length=369, Percent_Identity=32.7913279132791, Blast_Score=196, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6323947, Length=355, Percent_Identity=34.0845070422535, Blast_Score=189, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6320173, Length=435, Percent_Identity=30.8045977011494, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=378, Percent_Identity=32.8042328042328, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6319714, Length=365, Percent_Identity=32.3287671232877, Blast_Score=172, Evalue=7e-44, Organism=Saccharomyces cerevisiae, GI6322912, Length=337, Percent_Identity=34.4213649851632, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6322323, Length=337, Percent_Identity=34.4213649851632, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6320224, Length=389, Percent_Identity=30.8483290488432, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6322427, Length=358, Percent_Identity=32.122905027933, Blast_Score=169, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6320449, Length=363, Percent_Identity=31.129476584022, Blast_Score=166, Evalue=9e-42, Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=29.7752808988764, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6321963, Length=386, Percent_Identity=29.5336787564767, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=30.2452316076294, Blast_Score=149, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=410, Percent_Identity=30.7317073170732, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6320400, Length=375, Percent_Identity=31.2, Blast_Score=145, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6319618, Length=408, Percent_Identity=28.4313725490196, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6323306, Length=422, Percent_Identity=24.6445497630332, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6322876, Length=430, Percent_Identity=27.4418604651163, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6324366, Length=418, Percent_Identity=26.555023923445, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6321374, Length=403, Percent_Identity=26.5508684863524, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI28574962, Length=361, Percent_Identity=39.3351800554017, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24584399, Length=376, Percent_Identity=34.0425531914894, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=36.9272237196765, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24662330, Length=409, Percent_Identity=34.2298288508557, Blast_Score=218, Evalue=4e-57, Organism=Drosophila melanogaster, GI24644479, Length=371, Percent_Identity=35.3099730458221, Blast_Score=215, Evalue=4e-56, Organism=Drosophila melanogaster, GI24644487, Length=371, Percent_Identity=35.3099730458221, Blast_Score=215, Evalue=4e-56, Organism=Drosophila melanogaster, GI45551833, Length=371, Percent_Identity=35.3099730458221, Blast_Score=215, Evalue=4e-56, Organism=Drosophila melanogaster, GI24644485, Length=371, Percent_Identity=35.3099730458221, Blast_Score=215, Evalue=4e-56, Organism=Drosophila melanogaster, GI24644483, Length=371, Percent_Identity=35.3099730458221, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI281361218, Length=371, Percent_Identity=35.3099730458221, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24644481, Length=371, Percent_Identity=35.3099730458221, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI21356161, Length=340, Percent_Identity=37.6470588235294, Blast_Score=214, Evalue=9e-56, Organism=Drosophila melanogaster, GI21355075, Length=364, Percent_Identity=37.9120879120879, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI18857967, Length=363, Percent_Identity=35.2617079889807, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.3932584269663, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24584994, Length=404, Percent_Identity=32.4257425742574, Blast_Score=202, Evalue=2e-52, Organism=Drosophila melanogaster, GI24642151, Length=359, Percent_Identity=33.7047353760446, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24585582, Length=388, Percent_Identity=33.7628865979381, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24645031, Length=370, Percent_Identity=33.7837837837838, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI281365720, Length=317, Percent_Identity=37.8548895899054, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI28575014, Length=389, Percent_Identity=30.5912596401028, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24582080, Length=345, Percent_Identity=32.1739130434783, Blast_Score=168, Evalue=5e-42, Organism=Drosophila melanogaster, GI24582078, Length=345, Percent_Identity=32.1739130434783, Blast_Score=168, Evalue=5e-42, Organism=Drosophila melanogaster, GI17136248, Length=345, Percent_Identity=32.1739130434783, Blast_Score=168, Evalue=5e-42, Organism=Drosophila melanogaster, GI24582075, Length=345, Percent_Identity=32.1739130434783, Blast_Score=168, Evalue=5e-42, Organism=Drosophila melanogaster, GI24583281, Length=381, Percent_Identity=29.6587926509186, Blast_Score=168, Evalue=8e-42, Organism=Drosophila melanogaster, GI24583279, Length=382, Percent_Identity=29.5811518324607, Blast_Score=167, Evalue=9e-42, Organism=Drosophila melanogaster, GI24666101, Length=373, Percent_Identity=30.2949061662198, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24642822, Length=411, Percent_Identity=30.1703163017032, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=31.5642458100559, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=31.5642458100559, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=31.5642458100559, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI28571808, Length=354, Percent_Identity=31.3559322033898, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI28571809, Length=354, Percent_Identity=31.3559322033898, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI17136814, Length=362, Percent_Identity=32.5966850828729, Blast_Score=159, Evalue=2e-39, Organism=Drosophila melanogaster, GI19920478, Length=348, Percent_Identity=30.4597701149425, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=31.4763231197772, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI24643725, Length=390, Percent_Identity=27.1794871794872, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI21355559, Length=395, Percent_Identity=29.873417721519, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI20130173, Length=426, Percent_Identity=28.8732394366197, Blast_Score=145, Evalue=6e-35, Organism=Drosophila melanogaster, GI18859659, Length=440, Percent_Identity=28.8636363636364, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI28571338, Length=440, Percent_Identity=28.8636363636364, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=30.7926829268293, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=25, Blast_Score=105, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 47155; Mature: 47023
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTHLTEQKFSDFALHPKVVEVLEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCH MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHEEEEEECCCHHHHHHCCCEEEEEEC GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR CCCHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHH WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCC EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA HHCCCCEEEEEECCHHHCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEE CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS EHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCC G C >Mature Secondary Structure SKTHLTEQKFSDFALHPKVVEVLEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCH MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHEEEEEECCCHHHHHHCCCEEEEEEC GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR CCCHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHH WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCC EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA HHCCCCEEEEEECCHHHCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEE CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS EHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA