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The map label for this gene is yicS

Identifier: 82546066

GI number: 82546066

Start: 3726328

End: 3726621

Strand: Reverse

Name: yicS

Synonym: SBO_3710

Alternate gene names: 82546066

Gene position: 3726621-3726328 (Counterclockwise)

Preceding gene: 82546068

Following gene: 82546062

Centisome position: 82.45

GC content: 42.86

Gene sequence:

>294_bases
ATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTC
ACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATG
AAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCGATGGAACGTAAT
AATCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAA

Upstream 100 bases:

>100_bases
TTACTGACCACGCAAGCGCGTTTCGTACAGAATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACAC
ATTTGTAAAAGGTTGAATCC

Downstream 100 bases:

>100_bases
GAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAAT
GCAGTCAGCAACATCAATGT

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERN
NQSNYWEALGKVECPDM

Sequences:

>Translated_97_residues
MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERN
NQSNYWEALGKVECPDM
>Mature_97_residues
MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERN
NQSNYWEALGKVECPDM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082307, Length=97, Percent_Identity=100, Blast_Score=204, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YICS_ECOLI (Q2M7X4)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- RefSeq:   AP_004131.1
- RefSeq:   YP_588471.1
- ProteinModelPortal:   Q2M7X4
- STRING:   Q2M7X4
- EnsemblBacteria:   EBESCT00000002477
- EnsemblBacteria:   EBESCT00000018401
- GeneID:   1450300
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5965
- KEGG:   eco:b4555
- EcoGene:   EG14429
- eggNOG:   NOG13255
- GeneTree:   EBGT00050000011424
- HOGENOM:   HBG417215
- OMA:   ERNNQNN
- ProtClustDB:   CLSK880757
- Genevestigator:   Q2M7X4

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11070; Mature: 11070

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLM
CCCHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM
HCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLM
CCCHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM
HCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503