Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is yhjQ [H]
Identifier: 82545898
GI number: 82545898
Start: 3540844
End: 3541572
Strand: Reverse
Name: yhjQ [H]
Synonym: SBO_3533
Alternate gene names: 82545898
Gene position: 3541572-3540844 (Counterclockwise)
Preceding gene: 82545899
Following gene: 161984835
Centisome position: 78.36
GC content: 53.5
Gene sequence:
>729_bases GTGCGGGGAGGCGTGGGGACAACAACCATCACCGCCGCATTAGCCTGGTCATTACAAATGTTGGGAGAAAATGTCCTGGT GGTCGATGCCTGCCCGGACAACTTGTTGCGCCTGTCATTTAATGTTGATTTTACCCACCGTCAGGGCTGGGCCAGAGCGA TGCTGGATGGCCAGGACTGGCGTGACGCTGGGTTGCGCTACACCTCGCAGCTCGATTTGCTGCCTTTTGGTCAGTTATCC ATTGAAGAACAAGAAAATCCACAGCACAGGCAAACCCGGCTGAGCGATATTTGCTCCGGCTTACAGCAACTAAAAGCCAG CGGGCGTTACCAGTGGATTTTAATCGACTTACCGCGTGATGCCTCGCAGATAACCCACCAGCTGCTGAGTTTGTGCGATC ACTCGCTGGCAATCGTCAATGTGGATGCCAACTGCCATATCCGACTGCATCAGCAAGCGCTGCCGGATGGCGCACATATT TTGATTAATGACTTCCGTATTGGCAGTCAGGTTCAGGACGATATTTACCAGCTTTGGTTGCAAAGCCAGCGCCGATTACT GCCGATGCTCATTCATCGTGATGAAGCGATAGCTGAATGCCTGGCGGCTAAGCAACCAGTAGGTGAATATCGCAGTGATG CGCTGGCGGCTGAAGAGATACTGACGCTGGCGAACTGGTGCCTGTTGAACTACTCCGGGCTGAAAACGCCAGTCGGGAGT GCATCATGA
Upstream 100 bases:
>100_bases GCGAACAGTTGGCCGCGGCATTAAAACGCTGGCCGTTGCTGGCAGAGTTTGCGCAACAAAAGTAGGGGATTGGTGAATGG CCGTACTGGGATTGCAGGGG
Downstream 100 bases:
>100_bases GTATCCTGACCCGGTGGTTGCTTATCCCGCCGGTCAACGCGCGGCTTATCGGGCGTTATCGCGATTATCGTCGTCACGGT GCGTCGGCTTTCAGCGCGAC
Product: cell division protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLS IEEQENPQHRQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHI LINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAIAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGS AS
Sequences:
>Translated_242_residues MRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLS IEEQENPQHRQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHI LINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAIAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGS AS >Mature_242_residues MRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLS IEEQENPQHRQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHI LINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAIAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGS AS
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017746 [H]
Pfam domain/function: PF06564 YhjQ [H]
EC number: NA
Molecular weight: Translated: 27092; Mature: 27092
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDW CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCHHHCCHHHHHCCCCCC RDAGLRYTSQLDLLPFGQLSIEEQENPQHRQTRLSDICSGLQQLKASGRYQWILIDLPRD HHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC ASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILINDFRIGSQVQDDIYQLWL HHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHCCCCCEEEEEECCCCCHHHHHHHHHHH QSQRRLLPMLIHRDEAIAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGS HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AS CC >Mature Secondary Structure MRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDW CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCHHHCCHHHHHCCCCCC RDAGLRYTSQLDLLPFGQLSIEEQENPQHRQTRLSDICSGLQQLKASGRYQWILIDLPRD HHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC ASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILINDFRIGSQVQDDIYQLWL HHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHCCCCCEEEEEECCCCCHHHHHHHHHHH QSQRRLLPMLIHRDEAIAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGS HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]