Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

Click here to switch to the map view.

The map label for this gene is yhjQ [H]

Identifier: 82545898

GI number: 82545898

Start: 3540844

End: 3541572

Strand: Reverse

Name: yhjQ [H]

Synonym: SBO_3533

Alternate gene names: 82545898

Gene position: 3541572-3540844 (Counterclockwise)

Preceding gene: 82545899

Following gene: 161984835

Centisome position: 78.36

GC content: 53.5

Gene sequence:

>729_bases
GTGCGGGGAGGCGTGGGGACAACAACCATCACCGCCGCATTAGCCTGGTCATTACAAATGTTGGGAGAAAATGTCCTGGT
GGTCGATGCCTGCCCGGACAACTTGTTGCGCCTGTCATTTAATGTTGATTTTACCCACCGTCAGGGCTGGGCCAGAGCGA
TGCTGGATGGCCAGGACTGGCGTGACGCTGGGTTGCGCTACACCTCGCAGCTCGATTTGCTGCCTTTTGGTCAGTTATCC
ATTGAAGAACAAGAAAATCCACAGCACAGGCAAACCCGGCTGAGCGATATTTGCTCCGGCTTACAGCAACTAAAAGCCAG
CGGGCGTTACCAGTGGATTTTAATCGACTTACCGCGTGATGCCTCGCAGATAACCCACCAGCTGCTGAGTTTGTGCGATC
ACTCGCTGGCAATCGTCAATGTGGATGCCAACTGCCATATCCGACTGCATCAGCAAGCGCTGCCGGATGGCGCACATATT
TTGATTAATGACTTCCGTATTGGCAGTCAGGTTCAGGACGATATTTACCAGCTTTGGTTGCAAAGCCAGCGCCGATTACT
GCCGATGCTCATTCATCGTGATGAAGCGATAGCTGAATGCCTGGCGGCTAAGCAACCAGTAGGTGAATATCGCAGTGATG
CGCTGGCGGCTGAAGAGATACTGACGCTGGCGAACTGGTGCCTGTTGAACTACTCCGGGCTGAAAACGCCAGTCGGGAGT
GCATCATGA

Upstream 100 bases:

>100_bases
GCGAACAGTTGGCCGCGGCATTAAAACGCTGGCCGTTGCTGGCAGAGTTTGCGCAACAAAAGTAGGGGATTGGTGAATGG
CCGTACTGGGATTGCAGGGG

Downstream 100 bases:

>100_bases
GTATCCTGACCCGGTGGTTGCTTATCCCGCCGGTCAACGCGCGGCTTATCGGGCGTTATCGCGATTATCGTCGTCACGGT
GCGTCGGCTTTCAGCGCGAC

Product: cell division protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLS
IEEQENPQHRQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHI
LINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAIAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGS
AS

Sequences:

>Translated_242_residues
MRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLS
IEEQENPQHRQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHI
LINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAIAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGS
AS
>Mature_242_residues
MRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLS
IEEQENPQHRQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHI
LINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAIAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGS
AS

Specific function: Unknown

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017746 [H]

Pfam domain/function: PF06564 YhjQ [H]

EC number: NA

Molecular weight: Translated: 27092; Mature: 27092

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDW
CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCHHHCCHHHHHCCCCCC
RDAGLRYTSQLDLLPFGQLSIEEQENPQHRQTRLSDICSGLQQLKASGRYQWILIDLPRD
HHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
ASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILINDFRIGSQVQDDIYQLWL
HHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
QSQRRLLPMLIHRDEAIAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGS
HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AS
CC
>Mature Secondary Structure
MRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDW
CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCHHHCCHHHHHCCCCCC
RDAGLRYTSQLDLLPFGQLSIEEQENPQHRQTRLSDICSGLQQLKASGRYQWILIDLPRD
HHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
ASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILINDFRIGSQVQDDIYQLWL
HHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
QSQRRLLPMLIHRDEAIAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGS
HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]