Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is 82545276
Identifier: 82545276
GI number: 82545276
Start: 2879472
End: 2879675
Strand: Direct
Name: 82545276
Synonym: SBO_2877
Alternate gene names: NA
Gene position: 2879472-2879675 (Clockwise)
Preceding gene: 82545274
Following gene: 82545283
Centisome position: 63.71
GC content: 46.08
Gene sequence:
>204_bases ATGTTTTACGGCATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAGTAGCGG AGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGC AGCATTACCCATTTCGGCATATAAATAAATGCCTAATGAGATAG
Upstream 100 bases:
>100_bases ATGCGTGCACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAGGCGGT GTAAGTGAACTGTAGTTGCC
Downstream 100 bases:
>100_bases ATTCTGATGTAATATCCCCGGTAGCAATTCTGCTACCGGGAACAGCGAATTTAACGTCCAACCGCCGCTTTAGGCCGTTT CTTCGCACCAGCATTCACCG
Product: IS1 encoded protein
Products: NA
Alternate protein names: Transposase; Glycosy Hydrolase Family; Outer Membrane Fimbrial User Protein; Allantoinase; Ankyrin-Repeat Protein A; Efflux Pump Component MtrF; Minor Fimbrial Subunit
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MFYGMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPFRHINKCLMR
Sequences:
>Translated_67_residues MFYGMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPFRHINKCLMR >Mature_67_residues MFYGMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPFRHINKCLMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7366; Mature: 7366
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYGMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPFRH CCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH INKCLMR HHHHHCC >Mature Secondary Structure MFYGMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPFRH CCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH INKCLMR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA