Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is eutB [H]
Identifier: 82544902
GI number: 82544902
Start: 2456408
End: 2458030
Strand: Reverse
Name: eutB [H]
Synonym: SBO_2468
Alternate gene names: 82544902
Gene position: 2458030-2456408 (Counterclockwise)
Preceding gene: 82544903
Following gene: 82544900
Centisome position: 54.38
GC content: 56.93
Gene sequence:
>1623_bases ATGCAAAATGAATTGCAGACCGCGCTCTTTCAGGCGTTCGATACCCTGAATCTGCAACGGGTAAAAACATTTAGCGTTCC ACCGGTGACGCTTTGCGGTCCGGGCTCGGTGAGCAGTTGCGGACAGCAAGCGCAAACGCGTGGGCTGAAACATCTGTTCG TGATGGCAGACAGCTTTTTGCATCAGGCAGGGATGACCGCCGGGCTGACGCGCAGCCTGGCTGTTAAAGGCATCGCCATG ACGCTCTGGCCATGTCCGGTGGGCGAACCGTGCATCACCGACGTGTGTGCAGCCGTGGCGCAGTTGCGTGAGTCAGGCTG TGATGGGGTGATCGCATTTGGCGGCGGCTCGGTGCTGGATGCGGCGAAAGCCGTGGCGTTGCTGGTGACGAACCCGGATA GCACGCTGGCAGAGATGTCAGAAACCAGCGTTCTGCAACCGCGCTTGCCGCTGATTGCCTATGAAGATGACTGCGTGACG CGGCTGATTCAGGACGATGTTAACGAAACGGCCTACAACCAGATTAAAAACTGGAGCATCAGCGAACTGCGTGAGTATGT GCTGAGCGATGAAACTAGCGTGGACGACATTGCCTTTACCCGCAAAGGGCTGACCTCGGAAGTGGTCGCGGCGGTAGCGA AGATTTGCTCCAACGCGGACCTGATCTACGGCGCGAAGAAAATGCCGGTAATCAAAAAGGCCAATACCACCATCGGTATT CCGGGCACCTTCAGCGCCCGTTTGCAGCCAAATGACACTCGTGACGACGTGCAAAGTATCGCCGCGCAAATCTACGAAGG GCTTTCCTTCGGGGTGGGCGATGCGGTGATCGGCGTCAACCCGGTAACTGACGACGTGGAAAACTTAAGCCGCGTGCTGG ATACCATTTATGGCGTGATCGACAAATTCAACATCCCAACTCAGGGCTGCGTACTGGCGCACGTCACCACCCAGATCGAA GCGATTCGTCGCGGCGCGCCTGGCGGACTGATTTTCCAGAGTATCTGTGGCAGCGAAAAAGGGCTGAAAGAGTTTGGCGT GGAACTGGCGATGCTCGACGAAGCGCGCGCAGTGGGTGCAGAGTTCAACCGTATCGCCGGGGAAAACTGCCTCTACTTCG AAACCGGACAAGGCTCTGCGCTATCCGCTGGCGCTAACTTCGGCGCTGACCAGGTGACGATGGAAGCACGTAACTATGGG CTGGCGCGTCATTACGATCCGTTTATCGTCAACACCGTGGTCGGCTTTATTGGGCCGGAGTATCTCTACAACGACCGCCA GATTATCCGTGCTGGCTTAGAAGATCACTTTATGGGCAAGCTGAGCGGCATCTCTATGGGCTGTGACTGCTGCTACACCA ACCACGCTGACGCTGACCAGAACCTCAACGAAAACCTGATGATCCTGCTCGCCACCGCAGGCTGCAACTACATCATGGGG ATGCCGCTGGGTGATGACATCATGCTCAACTACCAGACCACCGCATTCCACGATACCGCCACTGTGCGTCAGTTACTCAA CCTGCGCCCGTCACCAGAGTTTGAACGCTGGCTGGAAAGCATGGGCATTATGGCAAACGGTCGCCTGACCAAACGGGCGG GCGATCCGTCACTGTTCTTCTGA
Upstream 100 bases:
>100_bases AAACAATTCCCGGCGTTACAGGTGCATTTACCGCAGCACAGTTTGTTTATGACCCCGCTGGCGATCGCCAGTAGTGGGCG AGAGAAAGCGGAGGGGCTAT
Downstream 100 bases:
>100_bases TGACGCGGAGATAACACATCATGGATCAAAAACAGATTGAAGAAATTGTACGCAGCGTGATGGCGTCAATGGGACAAACG GGTAATGCTGCCAACTTACT
Product: ethanolamine ammonia-lyase, heavy chain
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase large subunit [H]
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGSVSSCGQQAQTRGLKHLFVMADSFLHQAGMTAGLTRSLAVKGIAM TLWPCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLDAAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAYEDDCVT RLIQDDVNETAYNQIKNWSISELREYVLSDETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGI PGTFSARLQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHVTTQIE AIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFNRIAGENCLYFETGQGSALSAGANFGADQVTMEARNYG LARHYDPFIVNTVVGFIGPEYLYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIMG MPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDPSLFF
Sequences:
>Translated_540_residues MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGSVSSCGQQAQTRGLKHLFVMADSFLHQAGMTAGLTRSLAVKGIAM TLWPCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLDAAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAYEDDCVT RLIQDDVNETAYNQIKNWSISELREYVLSDETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGI PGTFSARLQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHVTTQIE AIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFNRIAGENCLYFETGQGSALSAGANFGADQVTMEARNYG LARHYDPFIVNTVVGFIGPEYLYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIMG MPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDPSLFF >Mature_540_residues MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGSVSSCGQQAQTRGLKHLFVMADSFLHQAGMTAGLTRSLAVKGIAM TLWPCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLDAAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAYEDDCVT RLIQDDVNETAYNQIKNWSISELREYVLSDETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGI PGTFSARLQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHVTTQIE AIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFNRIAGENCLYFETGQGSALSAGANFGADQVTMEARNYG LARHYDPFIVNTVVGFIGPEYLYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIMG MPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDPSLFF
Specific function: Ethanolamine utilization. [C]
COG id: COG4303
COG function: function code E; Ethanolamine ammonia-lyase, large subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082106, Length=403, Percent_Identity=97.7667493796526, Blast_Score=817, Evalue=0.0, Organism=Escherichia coli, GI87082107, Length=212, Percent_Identity=77.3584905660377, Blast_Score=315, Evalue=4e-87, Organism=Escherichia coli, GI48994951, Length=131, Percent_Identity=28.2442748091603, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1789163, Length=174, Percent_Identity=27.0114942528736, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010628 [H]
Pfam domain/function: PF06751 EutB [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 58244; Mature: 58244
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGSVSSCGQQAQTRGLKHLFVMADSFL CCHHHHHHHHHHHHCCCHHHEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH HQAGMTAGLTRSLAVKGIAMTLWPCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLD HHHCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH AAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAYEDDCVTRLIQDDVNETAYNQIKNWSI HHCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCH SELREYVLSDETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGI HHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCEEEC PGTFSARLQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVI CCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH DKFNIPTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGA HCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHCCEEEEHHHHHHHHH EFNRIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARHYDPFIVNTVVGFIGPE HHHHHCCCCEEEEECCCCCEEECCCCCCCHHEEHHHHHCCCHHCCCCHHHHHHHHHHCHH YLYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIMG HHHCCHHHHHHCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCEEEE MPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDPSLFF CCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHCCCEECCEEEECCCCCCCCC >Mature Secondary Structure MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGSVSSCGQQAQTRGLKHLFVMADSFL CCHHHHHHHHHHHHCCCHHHEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH HQAGMTAGLTRSLAVKGIAMTLWPCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLD HHHCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH AAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAYEDDCVTRLIQDDVNETAYNQIKNWSI HHCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCH SELREYVLSDETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGI HHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCEEEC PGTFSARLQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVI CCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH DKFNIPTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGA HCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHCCEEEEHHHHHHHHH EFNRIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARHYDPFIVNTVVGFIGPE HHHHHCCCCEEEEECCCCCEEECCCCCCCHHEEHHHHHCCCHHCCCCHHHHHHHHHHCHH YLYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIMG HHHCCHHHHHHCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCEEEE MPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDPSLFF CCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHCCCEECCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]