Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is cysP [H]
Identifier: 82544885
GI number: 82544885
Start: 2440861
End: 2441877
Strand: Reverse
Name: cysP [H]
Synonym: SBO_2450
Alternate gene names: 82544885
Gene position: 2441877-2440861 (Counterclockwise)
Preceding gene: 161984893
Following gene: 82544884
Centisome position: 54.03
GC content: 53.79
Gene sequence:
>1017_bases ATGGCCGTTAACTTACTGAAAAAGAACTCACTCGCGCTGGTCGCTTCTCTGCTGCTGGCGGGCCATGTACAGGCAACGGA ACTGCTGAACAGTTCTTATGACGTCTCCCGCGAGCTGTTTGCCGCCCTGAATCCGCCGTTTGAACAGCAATGGGCAAAAG ATAACGGCGGCGACAAACTGACGATAAAACAATCTCATGCCGGGTCATCAAAACAGGCGCTGGCAATTTTGCAGGGCTTA AAAACCGACGTTGTCACTTATAACCAGGTGACCGACGTACAAATTCTGCACGACAAAGGCAAGCTGATCCCGGCTGACTG GCAGTCGCGCCTGCCGAATAATAGCTCGCCGTTCTACTCCACCATGGGCTTCCTGGTGCGTAAGGGCAACCCGAAGAATA TCCACGACTGGAACGACCTGGTGCGCTCCGACGTGAAGCTGATTTTCCCGAACCCGAAAACGTCGGGTAACGCGCGTTAT ACCTATCTGGCGGCATGGGGCGCAGCGGATAAAGCTGACGGTGGCGACAAAGCCAAAACCGAACAGTTTATGACCCAGTT CCTGAAAAACGTTGAAGTGTTCGATACTGGCGGTCGTGGCGCGACCACCACTTTTGCCGAGCGCGGCCTGGGCGATGTAC TGATCAGCTTCGAGTCGGAAGTGAACAACATCCGTAAACAGTATGAAGCGCAAGGCTTTGAAGTGGTGATTCCGAAAACC AACATTCTGGCGGAATTCCCGGTGGCGTGGGTCGATAAAAACGTGCAGGCCAACGGTACGGAAAAAGCAGCAAAAGCCTA CCTGAACTGGCTCTACAGCCCGCAGGCGCAGACCATCATCACCGACTATTACTACCGCGTAAATAACCCGGAAGTCATGG ACAAACTGAAAGATAAATTCCCGCAGACCGAGCTGTTCCGCGTGGAAGACAAATTTGGCTCCTGGCCGGAAGTGATGAAA ACCCACTTCACCAGCGGCGGCGAGTTAGACAAGCTGTTAGCGGCGGGGCGTAACTGA
Upstream 100 bases:
>100_bases ACTTCCAAATCACCAAACGGTATATAAAACCGTTACTCCTTTCACGTCCGTTATAAATATGATGGCTATTAGAAAGTCAT TAAATTTATAAGGGTGCGCA
Downstream 100 bases:
>100_bases TGTTTGCAGTTTCATCAAGACGCGTGCTGCCGGGCTTTACCTTAAGCCTCGGCACCAGTCTGCTGTTTGTGTGCCTGATT TTGCTGCTGCCGCTCTCCGC
Product: thiosulfate transporter subunit
Products: SO42- [Cytoplasm]; phosphate; ADP; S2O32- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGL KTDVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY TYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT NILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMK THFTSGGELDKLLAAGRN
Sequences:
>Translated_338_residues MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGL KTDVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY TYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT NILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMK THFTSGGELDKLLAAGRN >Mature_337_residues AVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLK TDVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYT YLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTN ILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKT HFTSGGELDKLLAAGRN
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. This protein specifically binds thiosulfate and is involved in its transmembrane transport [H]
COG id: COG4150
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1788765, Length=338, Percent_Identity=99.4082840236686, Blast_Score=693, Evalue=0.0, Organism=Escherichia coli, GI1790351, Length=323, Percent_Identity=46.1300309597523, Blast_Score=300, Evalue=1e-82,
Paralogues:
None
Copy number: 440 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37659; Mature: 37528
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS00092 N6_MTASE ; PS00401 PROK_SULFATE_BIND_1 ; PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKL CCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCCCEE TIKQSHAGSSKQALAILQGLKTDVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYS EEECCCCCCHHHHHHHHHHCHHCEEEECCCCEEEEEECCCCCCCCCHHHCCCCCCCCHHH TMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKAKT HHHHHEECCCCCCCCHHHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHH EQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT HHHHHHHHCCCEEEECCCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCC NILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKF CCHHHCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHC PQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRN CCCCEEEEHHHCCCCHHHHHHHCCCCCCHHHHHHCCCC >Mature Secondary Structure AVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKL CCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCCCEE TIKQSHAGSSKQALAILQGLKTDVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYS EEECCCCCCHHHHHHHHHHCHHCEEEECCCCEEEEEECCCCCCCCCHHHCCCCCCCCHHH TMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKAKT HHHHHEECCCCCCCCHHHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHH EQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT HHHHHHHHCCCEEEECCCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCC NILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKF CCHHHCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHC PQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRN CCCCEEEEHHHCCCCHHHHHHHCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: SO42- [Periplasm]; H2O; ATP; S2O32- [Periplasm] [C]
Specific reaction: SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2188959; 9205837; 9278503; 9298646 [H]