Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is fryB
Identifier: 82544855
GI number: 82544855
Start: 2409846
End: 2410172
Strand: Reverse
Name: fryB
Synonym: SBO_2413
Alternate gene names: 82544855
Gene position: 2410172-2409846 (Counterclockwise)
Preceding gene: 82544856
Following gene: 82544854
Centisome position: 53.32
GC content: 50.46
Gene sequence:
>327_bases ATGAGTAAGAAACTGATTGCCTTATGTGCCTGCCCAATGGGCCTGGCTCACACCTTTATGGCCGCTCAGGCGTTGGAAGA AGCGGCGGTAGAAGCCGGTTATGAAGTGAAAATTGAAACCCAGGGCGCGGACGGTATCCAGAATCGCCTGACGGCGCAGG ATATCGCCGAAGCAACCATCATCATCCACTCCGTGGCAGTTACCCCGGAAGATAATGAGCGTTTCGAATCACGCGACGTT TATGAAATCACTTTGCAGGACGCAATTAAAAACGCTGCGGGCATCATCAAAGAAATCGAAGAGATGATTGCCTCTGAACA ACAGTAA
Upstream 100 bases:
>100_bases GATTAATTCTCCAGTAAATGCATTATTTGTCTGGTAACGGCGATTTGTTTTGCACGTTCATAATTTCACTTGTCAACTAT CACTGAATGAGGAATTAACG
Downstream 100 bases:
>100_bases TATTCGACAGGGATAATTGTTATGGCCATTAAAAAACGCAGTGCAACCGTTGTGCCTGGCGTATCCGGTGCGGCAGCGGC AGTTAAGAATCCGCAGGCCT
Product: PTS system enzyme IIB component
Products: NA
Alternate protein names: PTS system fructose-like EIIB component 1
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDV YEITLQDAIKNAAGIIKEIEEMIASEQQ
Sequences:
>Translated_108_residues MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDV YEITLQDAIKNAAGIIKEIEEMIASEQQ >Mature_107_residues SKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVY EITLQDAIKNAAGIIKEIEEMIASEQQ
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane
COG id: COG1445
COG function: function code G; Phosphotransferase system fructose-specific component IIB
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain
Homologues:
Organism=Escherichia coli, GI1788730, Length=108, Percent_Identity=100, Blast_Score=217, Evalue=1e-58, Organism=Escherichia coli, GI1790387, Length=101, Percent_Identity=45.5445544554455, Blast_Score=97, Evalue=2e-22, Organism=Escherichia coli, GI87082348, Length=100, Percent_Identity=40, Blast_Score=89, Evalue=6e-20, Organism=Escherichia coli, GI1786951, Length=103, Percent_Identity=34.9514563106796, Blast_Score=74, Evalue=1e-15, Organism=Escherichia coli, GI1788492, Length=103, Percent_Identity=37.8640776699029, Blast_Score=69, Evalue=5e-14, Organism=Escherichia coli, GI1790390, Length=104, Percent_Identity=31.7307692307692, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PTFB1_ECO57 (P69810)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: C91037 - PIR: E85881 - RefSeq: NP_288957.1 - RefSeq: NP_311294.1 - ProteinModelPortal: P69810 - SMR: P69810 - EnsemblBacteria: EBESCT00000025413 - EnsemblBacteria: EBESCT00000057017 - GeneID: 915630 - GeneID: 959383 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z3653 - KEGG: ecs:ECs3267 - GeneTree: EBGT00070000031719 - HOGENOM: HBG564028 - OMA: NEELTMS - ProtClustDB: CLSK880379 - BioCyc: ECOL83334:ECS3267-MONOMER - GO: GO:0005737 - GO: GO:0016020 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003353 - TIGRFAMs: TIGR00829
Pfam domain/function: PF02302 PTS_IIB
EC number: =2.7.1.69
Molecular weight: Translated: 11735; Mature: 11604
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: PS51099 PTS_EIIB_TYPE_2
Important sites: ACT_SITE 11-11
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATI CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH IIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ HHHEEEECCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATI CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH IIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ HHHEEEECCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796