Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yfcQ [H]

Identifier: 82544817

GI number: 82544817

Start: 2360908

End: 2361396

Strand: Reverse

Name: yfcQ [H]

Synonym: SBO_2373

Alternate gene names: 82544817

Gene position: 2361396-2360908 (Counterclockwise)

Preceding gene: 82544818

Following gene: 82544816

Centisome position: 52.25

GC content: 54.19

Gene sequence:

>489_bases
ATGAAAAAATTCCTGCTCCTTTTACTGTGCGCTGGTTGCGGGGCTGTGCTGGCGGCGGAAGATGACATCACATTCCACGG
TACGCTGATGTCGCCGCCCGCCTGTAGCATCAGCGGCGGGCAAACCATCGAAGTGCAATTTCGCGATCTCATTATCGACA
GCATTGATGGCAATTATGGTCGTCAGAAAGTGGACTACGAACTGAGCTGCGACTCGGATGTCCGCGATCCCGAGTGGAAT
ATGACACTCTCCTGGACGGGGACTGCCACCTCCTACAACGACTCTGCTATTGAGACGGATGTACCGGGCTTCGGAATTGA
GCTTCAGCATGACGGTCAGCGTTTTAAGCTCAACGAGCCGCTTTCCATTAACGCCACCGATTTTAGCCAGAAGCCAAAGC
TGGAGGCGGTACCGGTCAAAGCGGCTGATGCGGTGCTGACGGACACGACCTTTTCTGCTTACGCAACCTTACGGGTGGAT
TACCAATGA

Upstream 100 bases:

>100_bases
ACACTCAGCCTCAGCTGAAAGCGGTGCCGGTAAAACAGAGCGGGGTGCAACTGACTCCGTCGGAGTTTAACGCCACGATG
ACCATGGTGGTGGATTACCA

Downstream 100 bases:

>100_bases
AAACAGCACACATTTATTCACCCGGTTATGCGCTGTTAGCAGGCCTGCTGCTGACCGCCAGCACAGGAGCACAGGCAGTC
GACAACAACCTGCATTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKKFLLLLLCAGCGAVLAAEDDITFHGTLMSPPACSISGGQTIEVQFRDLIIDSIDGNYGRQKVDYELSCDSDVRDPEWN
MTLSWTGTATSYNDSAIETDVPGFGIELQHDGQRFKLNEPLSINATDFSQKPKLEAVPVKAADAVLTDTTFSAYATLRVD
YQ

Sequences:

>Translated_162_residues
MKKFLLLLLCAGCGAVLAAEDDITFHGTLMSPPACSISGGQTIEVQFRDLIIDSIDGNYGRQKVDYELSCDSDVRDPEWN
MTLSWTGTATSYNDSAIETDVPGFGIELQHDGQRFKLNEPLSINATDFSQKPKLEAVPVKAADAVLTDTTFSAYATLRVD
YQ
>Mature_162_residues
MKKFLLLLLCAGCGAVLAAEDDITFHGTLMSPPACSISGGQTIEVQFRDLIIDSIDGNYGRQKVDYELSCDSDVRDPEWN
MTLSWTGTATSYNDSAIETDVPGFGIELQHDGQRFKLNEPLSINATDFSQKPKLEAVPVKAADAVLTDTTFSAYATLRVD
YQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788675, Length=162, Percent_Identity=76.5432098765432, Blast_Score=270, Evalue=3e-74,
Organism=Escherichia coli, GI1788676, Length=173, Percent_Identity=32.9479768786127, Blast_Score=81, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17720; Mature: 17720

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLLLLLCAGCGAVLAAEDDITFHGTLMSPPACSISGGQTIEVQFRDLIIDSIDGNYG
CHHHHEEHHHHCCCEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCC
RQKVDYELSCDSDVRDPEWNMTLSWTGTATSYNDSAIETDVPGFGIELQHDGQRFKLNEP
CEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCEEEEEECCCEEEECCC
LSINATDFSQKPKLEAVPVKAADAVLTDTTFSAYATLRVDYQ
CEECCCCCCCCCCEEEECCCCCCEEEECCCEEEEEEEEEECC
>Mature Secondary Structure
MKKFLLLLLCAGCGAVLAAEDDITFHGTLMSPPACSISGGQTIEVQFRDLIIDSIDGNYG
CHHHHEEHHHHCCCEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCC
RQKVDYELSCDSDVRDPEWNMTLSWTGTATSYNDSAIETDVPGFGIELQHDGQRFKLNEP
CEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCEEEEEECCCEEEECCC
LSINATDFSQKPKLEAVPVKAADAVLTDTTFSAYATLRVDYQ
CEECCCCCCCCCCEEEECCCCCCEEEECCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]