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The map label for this gene is yfcO [H]

Identifier: 82544813

GI number: 82544813

Start: 2358180

End: 2358944

Strand: Reverse

Name: yfcO [H]

Synonym: SBO_2369

Alternate gene names: 82544813

Gene position: 2358944-2358180 (Counterclockwise)

Preceding gene: 82544816

Following gene: 82544812

Centisome position: 52.19

GC content: 44.97

Gene sequence:

>765_bases
TTGTCTGGAGATTCAGGGGGCCAGTCTACAGAGTTTGAGTTTCATCTGATTATAGCGACGCCAGATTCAGTTAATTACGC
TATATTTAAGGCTACATTCATGCCCAATTCACAGCCGGATTTAGTTTCGTGGACTGGCGATAGTTCTACTCAACCATCTA
TGTCGAAAATTTCGGACAGCAGGGTATCCATGTCAGCCTGTCCTGGATTAGAGCAGTATGATAGCCAGACCAAAACGGGA
TGGACATGTAATGAATTAAAGATGTTTGTTTATTACGATGGGAATTTACATGGTTGTCCGTGGATTGTGTCGTCGTTTGT
TAAGAGTAGAGATCCCTTCGCTAAAACGTATGATGATGATTTTCCTGACTATATTGGCCCAACGAAGGTGAGTTCTTCAT
GTCCGGCGGTGCCCCTGGCACCGTATGATGTTTCCTGGAATGAAAATTATGTTGTACATAACAAAGTCGTCAGGTTGCAG
TCAACAGGTGGTGTTATTGAGCAAACACTGCCCACTTTCCTGATGGAAAATGGCAAACTGTGTAACGGGAATAATTTTGA
TGAGCGTGGTGTCTACTGCCGTTTTATCGCACAGCAGATGACCTTCTCGACTTCCGGCTGTGATAATGCCAAAGTGACGG
TGACGCCTGAGCCGCAACCGATTACGTCCAGGCAACTGCATGATATGAAGCTACGCGTGGACACGACATCTCGACAGCCC
ATAGATTCTACCTGCCGATTCACTTACATACTGAATATGTATTAG

Upstream 100 bases:

>100_bases
GCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTACTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATC
ACTTATTTAAGTGATACTGG

Downstream 100 bases:

>100_bases
CGCACCTTTTCTCACCTGGCAGGGTCATTCGCCCCTGCCATTCCGCGCTCCTGGCACAACACGCTCAACTCCTCAGGGCA
ACTCCGGCGGCAACCACTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSGDSGGQSTEFEFHLIIATPDSVNYAIFKATFMPNSQPDLVSWTGDSSTQPSMSKISDSRVSMSACPGLEQYDSQTKTG
WTCNELKMFVYYDGNLHGCPWIVSSFVKSRDPFAKTYDDDFPDYIGPTKVSSSCPAVPLAPYDVSWNENYVVHNKVVRLQ
STGGVIEQTLPTFLMENGKLCNGNNFDERGVYCRFIAQQMTFSTSGCDNAKVTVTPEPQPITSRQLHDMKLRVDTTSRQP
IDSTCRFTYILNMY

Sequences:

>Translated_254_residues
MSGDSGGQSTEFEFHLIIATPDSVNYAIFKATFMPNSQPDLVSWTGDSSTQPSMSKISDSRVSMSACPGLEQYDSQTKTG
WTCNELKMFVYYDGNLHGCPWIVSSFVKSRDPFAKTYDDDFPDYIGPTKVSSSCPAVPLAPYDVSWNENYVVHNKVVRLQ
STGGVIEQTLPTFLMENGKLCNGNNFDERGVYCRFIAQQMTFSTSGCDNAKVTVTPEPQPITSRQLHDMKLRVDTTSRQP
IDSTCRFTYILNMY
>Mature_253_residues
SGDSGGQSTEFEFHLIIATPDSVNYAIFKATFMPNSQPDLVSWTGDSSTQPSMSKISDSRVSMSACPGLEQYDSQTKTGW
TCNELKMFVYYDGNLHGCPWIVSSFVKSRDPFAKTYDDDFPDYIGPTKVSSSCPAVPLAPYDVSWNENYVVHNKVVRLQS
TGGVIEQTLPTFLMENGKLCNGNNFDERGVYCRFIAQQMTFSTSGCDNAKVTVTPEPQPITSRQLHDMKLRVDTTSRQPI
DSTCRFTYILNMY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium yadU [H]

Homologues:

Organism=Escherichia coli, GI87082086, Length=257, Percent_Identity=43.1906614785992, Blast_Score=195, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021407 [H]

Pfam domain/function: PF11245 DUF2544 [H]

EC number: NA

Molecular weight: Translated: 28405; Mature: 28274

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDSGGQSTEFEFHLIIATPDSVNYAIFKATFMPNSQPDLVSWTGDSSTQPSMSKISDS
CCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCHHHHCCC
RVSMSACPGLEQYDSQTKTGWTCNELKMFVYYDGNLHGCPWIVSSFVKSRDPFAKTYDDD
CEEHHHCCCHHHHCCCCCCCCCHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCC
FPDYIGPTKVSSSCPAVPLAPYDVSWNENYVVHNKVVRLQSTGGVIEQTLPTFLMENGKL
CCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCEE
CNGNNFDERGVYCRFIAQQMTFSTSGCDNAKVTVTPEPQPITSRQLHDMKLRVDTTSRQP
ECCCCCCCCCHHHEEEHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCC
IDSTCRFTYILNMY
CCCCEEEEEEEECC
>Mature Secondary Structure 
SGDSGGQSTEFEFHLIIATPDSVNYAIFKATFMPNSQPDLVSWTGDSSTQPSMSKISDS
CCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCHHHHCCC
RVSMSACPGLEQYDSQTKTGWTCNELKMFVYYDGNLHGCPWIVSSFVKSRDPFAKTYDDD
CEEHHHCCCHHHHCCCCCCCCCHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCC
FPDYIGPTKVSSSCPAVPLAPYDVSWNENYVVHNKVVRLQSTGGVIEQTLPTFLMENGKL
CCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCEE
CNGNNFDERGVYCRFIAQQMTFSTSGCDNAKVTVTPEPQPITSRQLHDMKLRVDTTSRQP
ECCCCCCCCCHHHEEEHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCC
IDSTCRFTYILNMY
CCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]