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The map label for this gene is yfcA [H]

Identifier: 82544808

GI number: 82544808

Start: 2353701

End: 2354510

Strand: Reverse

Name: yfcA [H]

Synonym: SBO_2364

Alternate gene names: 82544808

Gene position: 2354510-2353701 (Counterclockwise)

Preceding gene: 82544809

Following gene: 82544807

Centisome position: 52.09

GC content: 52.96

Gene sequence:

>810_bases
ATGGAAACGTTTAATAGCCTGTTTATGGTTTCCCCGCTGTTGCTGGGAGTTCTCTTTTTTGTCGCCATGCTGGCGGGATT
TATCGACTCGATTGCCGGTGGCGGTGGGTTACTCACCATTCCGGCATTGATGGCTGCGGGAATGTCTCCCGCTAACGCGC
TGGCAACCAATAAACTGCAAGCCTGCGGCGGCTCTATTTCCGCCACTATCTACTTTATTCGCCGCAAAGTGGTTAGTTTA
AGCGATCAGAAACTCAATATCGCCATGACCTTTGCCGGCTCAATGAGCGGCGCACTGCTGGTGCAATACGTTCAGGCTGA
TGTCTTACGGCAGATTTTGCCCATTCTGGTAATTTGTATCGGCCTCTATTTCTTGCTGATGCCAAAGCTGGGTGAAGAAG
ATCGCCAGCGCCGGATGTACGGTTTACCCTTCGCGTTAATTGCCGGTGGCTGCGTCGGTTTTTATGACGGATTCTTTGGC
CCGGCTGCCGGATCGTTTTACGCGCTGGCCTTCGTTACGCTGTGCGGATTCAACCTCGCCAAAGCCACGGCTCACGCCAA
ATTACTCAACGCAACGTCAAACATTGGCGGTCTGCTGCTGTTTATTCTCGGCGGCAAAGTGATTTGGGCGACGGGCTTTG
TCATGCTGGTGGGGCAGTTCCTCGGCGCGCGCATGGGTTCAAGACTGGTGCTGAGCAAAGGACAAAAACTGATCCGCCCG
ATGATCGTTATCGTCTCGGCGGTGATGAGTGCCAAATTACTTTACGATAGCCACGGACAGGAGATCCTCCACTGGTTGGT
GATGAACTAA

Upstream 100 bases:

>100_bases
GGTTTGCACCTCCAAAACCAGGAACAACAAAGCCTGAGAAGAAGACACCGCCTCCGTTGCCGCCTTCCTGCCAGGCGCTA
CTGGATGAGCACGTGATCTA

Downstream 100 bases:

>100_bases
TGAACAGTACACACCACTATGAGCAGTTGATTGAAATTTTTAATAGCTGCTTTGCCGATGAATTTAATACCCGTCTGATT
AAAGGCGACGACGAACCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSL
SDQKLNIAMTFAGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
MIVIVSAVMSAKLLYDSHGQEILHWLVMN

Sequences:

>Translated_269_residues
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSL
SDQKLNIAMTFAGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
MIVIVSAVMSAKLLYDSHGQEILHWLVMN
>Mature_269_residues
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSL
SDQKLNIAMTFAGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
MIVIVSAVMSAKLLYDSHGQEILHWLVMN

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=269, Percent_Identity=99.2565055762082, Blast_Score=529, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 28658; Mature: 28658

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
ACGGSISATIYFIRRKVVSLSDQKLNIAMTFAGSMSGALLVQYVQADVLRQILPILVICI
HCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLA
HHHHHHCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHH
KATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH
MIVIVSAVMSAKLLYDSHGQEILHWLVMN
HHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
ACGGSISATIYFIRRKVVSLSDQKLNIAMTFAGSMSGALLVQYVQADVLRQILPILVICI
HCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLA
HHHHHHCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHH
KATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH
MIVIVSAVMSAKLLYDSHGQEILHWLVMN
HHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]