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The map label for this gene is dedA [H]

Identifier: 82544798

GI number: 82544798

Start: 2342977

End: 2343636

Strand: Reverse

Name: dedA [H]

Synonym: SBO_2354

Alternate gene names: 82544798

Gene position: 2343636-2342977 (Counterclockwise)

Preceding gene: 82544799

Following gene: 82544797

Centisome position: 51.85

GC content: 47.42

Gene sequence:

>660_bases
ATGGACCTGATTTATTTCCTCATCGATTTTATCCTGCACATTGACGTGCATCTGGCAGAGCTGGTCGCGGAGTACGGCGT
CTGGGTTTATGCCATTCTGTTTTTGATTCTGTTCTGCGAAACGGGGCTGGTGGTAACGCCATTCCTGCCTGGTGATTCGC
TGCTGTTTGTTGCTGGTGCATTGGCGTCGCTGGAAACTAACGATCTCAATGTCCATATGATGGTGGTGCTTATGTTGATT
GCCGCTATTGTCGGTGATGCAGTGAACTATACCATTGGACGGTTATTTGGTGACAAACTGTTCAGTAACCCGGATTCGAA
AATCTTTCGTTGCAGTTATCTTGATAAGACTCATCAGTTTTACGAGAGACATGGCGGCAAAACGATTATTCTCGCCCGTT
TTGTACCGATCGTCAGAACGTTCGCGCCGTTTGTTGCGGGAATGGGCCACATGTCGTACCGTCATTTCGCCGCTTATAAC
GTGATCGGCGCACTGTTGTGGGTACTGATTTTTACCTACGCGGGTTATTTCTTCGGCATGCTCCCCTTCATTCAGAGCAA
CCTTAAGCTGATGATTGTTGGCATTATTTTTGTTTCAATATTGCCTGGGGTTTTCGAATTTATTCGTCACAAACGCGCTG
CGGCACGCGCCGCAAAATAA

Upstream 100 bases:

>100_bases
CTATTTCTGGCGGACTAACGAGAATAATGCTCGGAACATTTCAGGCTGTAGCCAACGTAGTTACAGCCTGAAAGATGACG
AGTACAAGGCATAGGCAAAT

Downstream 100 bases:

>100_bases
AAAGTAACTCCGCGGTTCGACCACTTTTTTATCCAAAGTTTCGGGCTGTTATGTTTTAATGTGCAACATTCATGGTCTGT
TGGGGGCAAAAATGGCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLI
AAIVGDAVNYTIGRLFGDKLFSNPDSKIFRCSYLDKTHQFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLIFTYAGYFFGMLPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAAK

Sequences:

>Translated_219_residues
MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLI
AAIVGDAVNYTIGRLFGDKLFSNPDSKIFRCSYLDKTHQFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLIFTYAGYFFGMLPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAAK
>Mature_219_residues
MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLI
AAIVGDAVNYTIGRLFGDKLFSNPDSKIFRCSYLDKTHQFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALLWVLIFTYAGYFFGMLPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAAK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=210, Percent_Identity=93.3333333333333, Blast_Score=397, Evalue=1e-112,
Organism=Escherichia coli, GI1789481, Length=164, Percent_Identity=34.1463414634146, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1789384, Length=194, Percent_Identity=31.4432989690722, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24639; Mature: 24639

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGDKLFSNPDSKIFRCSYLDKTHQF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
YERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLIFTYAGYFFGM
HHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAAK
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGDKLFSNPDSKIFRCSYLDKTHQF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
YERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLIFTYAGYFFGM
HHHCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAAK
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]