Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is ybeZ [H]

Identifier: 82543104

GI number: 82543104

Start: 543219

End: 544298

Strand: Reverse

Name: ybeZ [H]

Synonym: SBO_0524

Alternate gene names: 82543104

Gene position: 544298-543219 (Counterclockwise)

Preceding gene: 82543105

Following gene: 82543103

Centisome position: 12.04

GC content: 54.54

Gene sequence:

>1080_bases
ATGTTCAGCTTCCGGCGGCATACAGATAAGAGGAACGGTTTGAACATAGACACTCGCGAAATCACCCTGGAGCCAGCAGA
CAACGCGCGTCTGTTGAGCCTGTGCGGCCCGTTTGATGACAACATCAAGCAGCTCGAACGCCGTCTCGGCATCGAGATCA
ATCGCCGCGACAACCACTTTAAACTGACCGGCCGTCCGATTTGCGTCACCGCTGCGGCAGACATTCTGCGTAGCCTGTAT
GTCGATACAGCCCCGATGCGCGGTCAGATTCAGGATATCGAACCGGAACAGATCCACCTTGCGATTAAAGAAGCGCGGGT
ACTGGAGCAAAGCGCGGAGAGCGTGCCGGAGTACGGCAAAGCGGTCAATATCAAAACTAAACGCGGCGTAATTAAGCCGC
GCACGCCAAACCAGGCGCAGTACATCGCCAATATTCTCGACCATGACATTACCTTCGGCGTTGGCCCGGCGGGTACGGGT
AAAACCTACCTGGCAGTGGCTGCGGCAGTTGATGCCCTGGAGCGTCAGGAGATTCGCCGTATTCTGCTGACTCGTCCGGC
GGTCGAAGCCGGTGAGAAACTGGGCTTCCTGCCTGGCGATTTAAGCCAGAAAGTAGACCCGTATCTGCGCCCACTGTACG
ACGCGCTGTTTGAAATGCTGGGCTTTGAGAAAGTTGAGAAACTGATTGAGCGCAACGTTATTGAAGTCGCGCCGCTGGCC
TATATGCGTGGTCGTACGCTGAACGACGCGTTTATCATTCTCGATGAGAGCCAGAACACCACCATCGAACAGATGAAGAT
GTTCCTGACCCGTATCGGTTTTAACTCAAAAGCGGTTATCACCGGCGACGTCACACAGATCGACCTGCCGCGTAATACTA
AATCAGGCTTACGTCACGCCATCGAAGTACTGGCCGATGTCGAAGAGATCAGCTTTAACTTCTTCCACAGCGAAGACGTG
GTTCGTCACCCTGTGGTGGCGCGTATCGTTAACGCCTATGAAGCCTGGGAAGAAGCCGAACAAAAACGAAAAGCGGCGCT
GGCGGCAGAACGCAAGCGCGAAGAACAGGAACAAAAATGA

Upstream 100 bases:

>100_bases
CGTTCCGGTGGGCCTTGTTTTTTCTCTCTTTATCCCCATCTTTATCGCAATGCTTGCGCCTTTTTCCTGTGGCGTGAATA
ATTTCCTTATAGGCCGGTGA

Downstream 100 bases:

>100_bases
GTCAGGTGATCCTCGATTTACAACTGGCATGTGAAGATAATTCCGGGTTACCGGAAGAGAGCCAGTTTCAAACATGGCTG
AATGCGGTGATCCCGCAGTT

Product: ATP-binding protein in pho regulon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MFSFRRHTDKRNGLNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAAADILRSLY
VDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTG
KTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLA
YMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSEDV
VRHPVVARIVNAYEAWEEAEQKRKAALAAERKREEQEQK

Sequences:

>Translated_359_residues
MFSFRRHTDKRNGLNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAAADILRSLY
VDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTG
KTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLA
YMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSEDV
VRHPVVARIVNAYEAWEEAEQKRKAALAAERKREEQEQK
>Mature_359_residues
MFSFRRHTDKRNGLNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAAADILRSLY
VDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTG
KTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLA
YMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSEDV
VRHPVVARIVNAYEAWEEAEQKRKAALAAERKREEQEQK

Specific function: Unknown

COG id: COG1702

COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoH family [H]

Homologues:

Organism=Escherichia coli, GI145693103, Length=346, Percent_Identity=99.7109826589595, Blast_Score=704, Evalue=0.0,
Organism=Escherichia coli, GI1787257, Length=233, Percent_Identity=41.6309012875536, Blast_Score=186, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003714 [H]

Pfam domain/function: PF02562 PhoH [H]

EC number: NA

Molecular weight: Translated: 40655; Mature: 40655

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSFRRHTDKRNGLNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHF
CCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCEEECCCCEE
KLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESVPEYGK
EECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
AVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRR
EEEEEHHCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
ILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLA
HHHCCCCHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHH
YMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHA
HHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHH
IEVLADVEEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAALAAERKREEQEQK
HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSFRRHTDKRNGLNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHF
CCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCEEECCCCEE
KLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESVPEYGK
EECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
AVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRR
EEEEEHHCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
ILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLA
HHHCCCCHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHH
YMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHA
HHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHHHHH
IEVLADVEEISFNFFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAALAAERKREEQEQK
HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]