| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is ybeZ [C]
Identifier: 78779764
GI number: 78779764
Start: 1293205
End: 1294161
Strand: Reverse
Name: ybeZ [C]
Synonym: PMT9312_1380
Alternate gene names: 78779764
Gene position: 1294161-1293205 (Counterclockwise)
Preceding gene: 78779765
Following gene: 78779763
Centisome position: 75.72
GC content: 36.15
Gene sequence:
>957_bases ATGAAGGAAGTTTCCAAAACTGGTCACTTCACAATTGATTTGCCAAGCTCTGATGCTGCTACAGCATTATCTGGGCCTGG AAATTCTTTCTTGAAAAAGTTTGAGTCTCTAACAGGAGTTTCTTTAACTATAAGAGGCTTACAACTTGAGATGAATGGAG TTATATCTAAGATTGAGAGGGCATCAGCATTAGTAGAGCTGACAAGACCAATTTGGGAACAAGGGCTAGAAGTCCCAGAG GTAGATCTTAAAGCCGCTTTAAGTTCTTTAAATATGGGAGAGTCCTCTTCACATGCTGAACTTGGGAAAAAAGTTCTTGC GCGTTCCAAGGAGGGAAGATATTTAAGACCAAGAACTATAAGACAAAAAGAATATGTTGAATCAATTGAAACCTTTGATC TTACGTTCGCAATTGGTCCAGCTGGAACTGGTAAGACATTTTTGGCAACTGTTTGCGCAGCAAGACTATTGAACGAGAAA AAAATAGAAAAAATTGTTTTAACAAGACCAGCCGTAGAAGCTGGTGAAAGTTTGGGATTTCTTCCTGGAGATTTGCAACA AAAAGTAGATCCATATTTAAGACCCCTATTTGATTCTTTGCATAGTATTTTCGGACTTGATAGAACAAATTCGTTAATAG ATAAAGGAATTATTGAAGTTGCTCCTTTAGCATTTATGAGAGGCAGAACCTTGGATAACTCTTTGGTAATTTTAGATGAA GCACAAAATACAACTTGCTCTCAAATGAGAATGTTTTTAACCAGATTAGGTGAGAGATCAAAAATGGTTGTAAACGGAGA TATTACTCAAATTGATTTAAAAAGAGATCAGGAAAGTGGCCTCATCGAAGCATCAAGAATTTTCTCTGAGACTGAAGGTA TAAAATTTTGTTACTTAACTGTTGAAGATGTAGTTCGTCATCCTTTAGTTCAGAAAATTATTGAGGCTTATCAATAA
Upstream 100 bases:
>100_bases GATCAAAAACGAAGAAAATGATAGTAGTAAAGCTGAAAGCGATAGTAATGAAGCTGAAAGCTAGTGGTTTGATAAATTTT TATTCTTATACAACAACTAA
Downstream 100 bases:
>100_bases CTTTGTATCTCTGGTGATCCGTACCCTAGAATTTTAAAAATCAAGTAGAATAGAATTATATTTAAAAAAAAAATGCCAGC AAGTAGTAATTTTAATCAAG
Product: phoH-like phosphate starvation-inducible protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKEVSKTGHFTIDLPSSDAATALSGPGNSFLKKFESLTGVSLTIRGLQLEMNGVISKIERASALVELTRPIWEQGLEVPE VDLKAALSSLNMGESSSHAELGKKVLARSKEGRYLRPRTIRQKEYVESIETFDLTFAIGPAGTGKTFLATVCAARLLNEK KIEKIVLTRPAVEAGESLGFLPGDLQQKVDPYLRPLFDSLHSIFGLDRTNSLIDKGIIEVAPLAFMRGRTLDNSLVILDE AQNTTCSQMRMFLTRLGERSKMVVNGDITQIDLKRDQESGLIEASRIFSETEGIKFCYLTVEDVVRHPLVQKIIEAYQ
Sequences:
>Translated_318_residues MKEVSKTGHFTIDLPSSDAATALSGPGNSFLKKFESLTGVSLTIRGLQLEMNGVISKIERASALVELTRPIWEQGLEVPE VDLKAALSSLNMGESSSHAELGKKVLARSKEGRYLRPRTIRQKEYVESIETFDLTFAIGPAGTGKTFLATVCAARLLNEK KIEKIVLTRPAVEAGESLGFLPGDLQQKVDPYLRPLFDSLHSIFGLDRTNSLIDKGIIEVAPLAFMRGRTLDNSLVILDE AQNTTCSQMRMFLTRLGERSKMVVNGDITQIDLKRDQESGLIEASRIFSETEGIKFCYLTVEDVVRHPLVQKIIEAYQ >Mature_318_residues MKEVSKTGHFTIDLPSSDAATALSGPGNSFLKKFESLTGVSLTIRGLQLEMNGVISKIERASALVELTRPIWEQGLEVPE VDLKAALSSLNMGESSSHAELGKKVLARSKEGRYLRPRTIRQKEYVESIETFDLTFAIGPAGTGKTFLATVCAARLLNEK KIEKIVLTRPAVEAGESLGFLPGDLQQKVDPYLRPLFDSLHSIFGLDRTNSLIDKGIIEVAPLAFMRGRTLDNSLVILDE AQNTTCSQMRMFLTRLGERSKMVVNGDITQIDLKRDQESGLIEASRIFSETEGIKFCYLTVEDVVRHPLVQKIIEAYQ
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=315, Percent_Identity=44.7619047619048, Blast_Score=260, Evalue=9e-71, Organism=Escherichia coli, GI1787257, Length=221, Percent_Identity=43.8914027149321, Blast_Score=186, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 35175; Mature: 35175
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVSKTGHFTIDLPSSDAATALSGPGNSFLKKFESLTGVSLTIRGLQLEMNGVISKIER CCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHH ASALVELTRPIWEQGLEVPEVDLKAALSSLNMGESSSHAELGKKVLARSKEGRYLRPRTI HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEECCHHH RQKEYVESIETFDLTFAIGPAGTGKTFLATVCAARLLNEKKIEKIVLTRPAVEAGESLGF HHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC LPGDLQQKVDPYLRPLFDSLHSIFGLDRTNSLIDKGIIEVAPLAFMRGRTLDNSLVILDE CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC AQNTTCSQMRMFLTRLGERSKMVVNGDITQIDLKRDQESGLIEASRIFSETEGIKFCYLT CCCCHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEE VEDVVRHPLVQKIIEAYQ HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKEVSKTGHFTIDLPSSDAATALSGPGNSFLKKFESLTGVSLTIRGLQLEMNGVISKIER CCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHH ASALVELTRPIWEQGLEVPEVDLKAALSSLNMGESSSHAELGKKVLARSKEGRYLRPRTI HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEECCHHH RQKEYVESIETFDLTFAIGPAGTGKTFLATVCAARLLNEKKIEKIVLTRPAVEAGESLGF HHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC LPGDLQQKVDPYLRPLFDSLHSIFGLDRTNSLIDKGIIEVAPLAFMRGRTLDNSLVILDE CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC AQNTTCSQMRMFLTRLGERSKMVVNGDITQIDLKRDQESGLIEASRIFSETEGIKFCYLT CCCCHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEE VEDVVRHPLVQKIIEAYQ HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]