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The map label for this gene is 78779756

Identifier: 78779756

GI number: 78779756

Start: 1286988

End: 1287644

Strand: Reverse

Name: 78779756

Synonym: PMT9312_1372

Alternate gene names: NA

Gene position: 1287644-1286988 (Counterclockwise)

Preceding gene: 78779757

Following gene: 78779750

Centisome position: 75.34

GC content: 34.7

Gene sequence:

>657_bases
ATGAATTTAGATATTAGGTTTGATTTTCAAAGAAGGGAAAGGCTTGGACTCATTGAAGCAATTTGGGGACAAGATAAGAG
TATCGATCAATTAAAGAGATTATCTGAAAATGTATTAAGTAAAAATGAGGTTGTTTTCATTACTAGGATTAATAGTGAAA
AAGCTATTGATCTTTTAGATTTTTATGATGATGCACGATTCTATGAAGAAGCAAAATGCCTGATAATTGGCAAAAATCTA
AATAAACTTAATACAAATAAAAAAGTTGCCATAATTTCAGGCGGTTCTAGTGATTTGCCTGTAACACTTGAAGCTCAATT
AGCGCTTGAAATCTATGGAGTTAATTGTCAATCTTTTATAGATGTTGGAGTGGCAGGACTTCATCGATTAATTAGTCAGT
TAGAAGAAATCAATAAATACGATGTATTAATAGTTTGTGCTGGGATGGAAGGAGCTTTAGCAACTGTGGTGGGAGGATTG
TTGGCGCAACCAATAATCGCAGTACCAGTCTCAGTCGGATACGGCGTTAGCAAGAATGGAGAAACTGCTTTAAATAGTAT
GTTGTCAAGTTGTTCTCCAGGCGTTGCAGTTATGAATATAGATAATGGTTACGGAGCAGCAATGGCAGCTCTAAGGATTA
TTAAAAGTATTTCGTAA

Upstream 100 bases:

>100_bases
ATGTAGTGCAAGAAAAATTTGAAGATAATGTTAAGACTGATTTAAATGTAAGTGAAAACCCTTTTGAATTGATTTACGAG
GGAGAGTTAAATAAGCAAGT

Downstream 100 bases:

>100_bases
ATACTTACTTTTTTTCGATTTCTAATAGGTTTTCTATCCATAAATTGAGTTGTTTTGAAAGCATCCCTTCTTCTCTCATT
TTGATTGCCTTAATCACGAC

Product: putative circadian phase modifier CpmA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNLDIRFDFQRRERLGLIEAIWGQDKSIDQLKRLSENVLSKNEVVFITRINSEKAIDLLDFYDDARFYEEAKCLIIGKNL
NKLNTNKKVAIISGGSSDLPVTLEAQLALEIYGVNCQSFIDVGVAGLHRLISQLEEINKYDVLIVCAGMEGALATVVGGL
LAQPIIAVPVSVGYGVSKNGETALNSMLSSCSPGVAVMNIDNGYGAAMAALRIIKSIS

Sequences:

>Translated_218_residues
MNLDIRFDFQRRERLGLIEAIWGQDKSIDQLKRLSENVLSKNEVVFITRINSEKAIDLLDFYDDARFYEEAKCLIIGKNL
NKLNTNKKVAIISGGSSDLPVTLEAQLALEIYGVNCQSFIDVGVAGLHRLISQLEEINKYDVLIVCAGMEGALATVVGGL
LAQPIIAVPVSVGYGVSKNGETALNSMLSSCSPGVAVMNIDNGYGAAMAALRIIKSIS
>Mature_218_residues
MNLDIRFDFQRRERLGLIEAIWGQDKSIDQLKRLSENVLSKNEVVFITRINSEKAIDLLDFYDDARFYEEAKCLIIGKNL
NKLNTNKKVAIISGGSSDLPVTLEAQLALEIYGVNCQSFIDVGVAGLHRLISQLEEINKYDVLIVCAGMEGALATVVGGL
LAQPIIAVPVSVGYGVSKNGETALNSMLSSCSPGVAVMNIDNGYGAAMAALRIIKSIS

Specific function: Unknown

COG id: COG1691

COG function: function code R; NCAIR mutase (PurE)-related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000031 [H]

Pfam domain/function: PF00731 AIRC [H]

EC number: NA

Molecular weight: Translated: 23625; Mature: 23625

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDIRFDFQRRERLGLIEAIWGQDKSIDQLKRLSENVLSKNEVVFITRINSEKAIDLLD
CCCEEEECHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH
FYDDARFYEEAKCLIIGKNLNKLNTNKKVAIISGGSSDLPVTLEAQLALEIYGVNCQSFI
HHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCHHHHH
DVGVAGLHRLISQLEEINKYDVLIVCAGMEGALATVVGGLLAQPIIAVPVSVGYGVSKNG
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCHHEEEEECCCCCCCCC
ETALNSMLSSCSPGVAVMNIDNGYGAAMAALRIIKSIS
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLDIRFDFQRRERLGLIEAIWGQDKSIDQLKRLSENVLSKNEVVFITRINSEKAIDLLD
CCCEEEECHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH
FYDDARFYEEAKCLIIGKNLNKLNTNKKVAIISGGSSDLPVTLEAQLALEIYGVNCQSFI
HHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCHHHHH
DVGVAGLHRLISQLEEINKYDVLIVCAGMEGALATVVGGLLAQPIIAVPVSVGYGVSKNG
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCHHEEEEECCCCCCCCC
ETALNSMLSSCSPGVAVMNIDNGYGAAMAALRIIKSIS
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]