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The map label for this gene is yibD [C]

Identifier: 78779717

GI number: 78779717

Start: 1247830

End: 1248708

Strand: Reverse

Name: yibD [C]

Synonym: PMT9312_1333

Alternate gene names: 78779717

Gene position: 1248708-1247830 (Counterclockwise)

Preceding gene: 78779718

Following gene: 78779716

Centisome position: 73.06

GC content: 24.0

Gene sequence:

>879_bases
ATGAATATCTTTTTTTCAATAATAATCCCAGTTTTTAATAGGCCATTTGAAATATTAGAAGCTTTTGAAAGTATTAAATT
ACAAAAAAAATCAAATATAGAAGTCTTAGTTATTGATGATTCTAATGATGATACAAGTAAAAATATAAGCGACTTTATTT
ATTTAAATAGTTCTATTAAAATTAAACATATTAAACCAACAAAAAGAGCAGGGGTTAGTAAATCTAGAAATATTGGCATA
ATTTCATCTATAGGAAATGTTATTTTGTTCTTAGATTCAGATGATAAATTAATAATTGGAGCTCTTGATCATGTAGAGAA
AGCTTTTATTAAATATAAAAATTTAGATCTATATTTTGGTTCTTGTATATATAAGTCCTCAAGAAGCAATCATTATTCTG
ATAAACAATTGCCAAAAATAGGTTACTATTCTGACTATATTAAAAGTATAAATCAACCTGAGATGTTGCCTGCTTTTAGA
TGCGAAAGTGAAATAAGGAACAATTTTTTGTATGACGAAAGTCTAACTGGATTTGAGCATATTCTTTACTTAAGAATTCT
TAAAAATGGAGGTATCTTTTATCGAGATCCTAATTTTGTAAGGTTATATGATGATGAAGGTGATGATAGGTTATGTATAA
GTAATCCAAAAAATTATAAAAACATGAGAAAAGGGTACCTAAAGTTAATCAGGATATTTGGATTTGATTTTTGCAGGTAT
AATATAAAAATCTTATTATTATACTTTGTAAAAATAATTATATATAATAGACTAATTGACCATAAAAGATTACTTTCTAT
TTCTAATATTTTAGGGATTTTAACCATACCAGTTCCAAAATTTTTTATAAAGCAATTAATATCTTTCTCAAAAAAATAA

Upstream 100 bases:

>100_bases
CTCCAATACTGTTGATTATCTTTTAAGTGACAGAAGAAATTTATATAGATAATATGAAGAATTTTAATAAATTTTTTTGG
TTGAATTTGCAAATTAAACA

Downstream 100 bases:

>100_bases
TTACATCCAATATTTATAGCAAAATTTTATATTATGATATTTAAAAAAAAATTACATTATGGAATTAAGTTTTAAAGAAA
TAAAATTGATATTTTTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNIFFSIIIPVFNRPFEILEAFESIKLQKKSNIEVLVIDDSNDDTSKNISDFIYLNSSIKIKHIKPTKRAGVSKSRNIGI
ISSIGNVILFLDSDDKLIIGALDHVEKAFIKYKNLDLYFGSCIYKSSRSNHYSDKQLPKIGYYSDYIKSINQPEMLPAFR
CESEIRNNFLYDESLTGFEHILYLRILKNGGIFYRDPNFVRLYDDEGDDRLCISNPKNYKNMRKGYLKLIRIFGFDFCRY
NIKILLLYFVKIIIYNRLIDHKRLLSISNILGILTIPVPKFFIKQLISFSKK

Sequences:

>Translated_292_residues
MNIFFSIIIPVFNRPFEILEAFESIKLQKKSNIEVLVIDDSNDDTSKNISDFIYLNSSIKIKHIKPTKRAGVSKSRNIGI
ISSIGNVILFLDSDDKLIIGALDHVEKAFIKYKNLDLYFGSCIYKSSRSNHYSDKQLPKIGYYSDYIKSINQPEMLPAFR
CESEIRNNFLYDESLTGFEHILYLRILKNGGIFYRDPNFVRLYDDEGDDRLCISNPKNYKNMRKGYLKLIRIFGFDFCRY
NIKILLLYFVKIIIYNRLIDHKRLLSISNILGILTIPVPKFFIKQLISFSKK
>Mature_292_residues
MNIFFSIIIPVFNRPFEILEAFESIKLQKKSNIEVLVIDDSNDDTSKNISDFIYLNSSIKIKHIKPTKRAGVSKSRNIGI
ISSIGNVILFLDSDDKLIIGALDHVEKAFIKYKNLDLYFGSCIYKSSRSNHYSDKQLPKIGYYSDYIKSINQPEMLPAFR
CESEIRNNFLYDESLTGFEHILYLRILKNGGIFYRDPNFVRLYDDEGDDRLCISNPKNYKNMRKGYLKLIRIFGFDFCRY
NIKILLLYFVKIIIYNRLIDHKRLLSISNILGILTIPVPKFFIKQLISFSKK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 34155; Mature: 34155

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFFSIIIPVFNRPFEILEAFESIKLQKKSNIEVLVIDDSNDDTSKNISDFIYLNSSIK
CCEEEEEHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCEE
IKHIKPTKRAGVSKSRNIGIISSIGNVILFLDSDDKLIIGALDHVEKAFIKYKNLDLYFG
EEEECCHHHCCCCCCCCCEEEECCCCEEEEECCCCCEEEEHHHHHHHHHHHHCCCEEEEC
SCIYKSSRSNHYSDKQLPKIGYYSDYIKSINQPEMLPAFRCESEIRNNFLYDESLTGFEH
CEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH
ILYLRILKNGGIFYRDPNFVRLYDDEGDDRLCISNPKNYKNMRKGYLKLIRIFGFDFCRY
HHHHHHHHCCCEEEECCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
NIKILLLYFVKIIIYNRLIDHKRLLSISNILGILTIPVPKFFIKQLISFSKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIFFSIIIPVFNRPFEILEAFESIKLQKKSNIEVLVIDDSNDDTSKNISDFIYLNSSIK
CCEEEEEHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCEE
IKHIKPTKRAGVSKSRNIGIISSIGNVILFLDSDDKLIIGALDHVEKAFIKYKNLDLYFG
EEEECCHHHCCCCCCCCCEEEECCCCEEEEECCCCCEEEEHHHHHHHHHHHHCCCEEEEC
SCIYKSSRSNHYSDKQLPKIGYYSDYIKSINQPEMLPAFRCESEIRNNFLYDESLTGFEH
CEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH
ILYLRILKNGGIFYRDPNFVRLYDDEGDDRLCISNPKNYKNMRKGYLKLIRIFGFDFCRY
HHHHHHHHCCCEEEECCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
NIKILLLYFVKIIIYNRLIDHKRLLSISNILGILTIPVPKFFIKQLISFSKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA