| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779703
Identifier: 78779703
GI number: 78779703
Start: 1232373
End: 1233536
Strand: Reverse
Name: 78779703
Synonym: PMT9312_1320
Alternate gene names: NA
Gene position: 1233536-1232373 (Counterclockwise)
Preceding gene: 78779711
Following gene: 78779702
Centisome position: 72.17
GC content: 26.63
Gene sequence:
>1164_bases ATGAAAAATTTAATAATATCTGCAAATTCTTTAAGTTTTATTTTAGATTATAAGTTGCAGTTAATTAGTTCTCTTTTAAA AAAAGATAGAGATATAAATTTATACGTACTTATACCTGATAAAACTCATGAGAAATATCAAGAAGATAATTTTCTTGAAT TTAAATCATTAGTTCCAGATAAGAATATCTTTTATTGTTTAAAAAAAGGTACTTCTCCTTTGGCGTTAATAAATAATATT TTTTGGTTTATAAATATATCAAGAAAGTTACCTCAAAATGGAAAATGTTATTTTGTATCTCATACAGCTACTATCAATAT TGCCTTGTTTTTCTTTTCTTTTATTTATAAAAATAAAAGAAATTTTGTATATAGATTTTTTATAACAGGATTCGGCCCAT CACGAATTAGGAAAAGCCTTAGATCAAGATTAATAGGTAGAGTTTATATTAAAATAATGCAATTAAGTTCCCAATTAAAT AAAAATAAAGTATTCGTTTTAAACACTCAAGATAGAGAAACGATTCAAGATTATAAACCTTTTAGAAAAGTTTATGTAAT AAGAGAATCAGGACTTCTTCTGGAAAATCTAATCAAAATATATAATATGCAAATTATAAAGCCTCCTTTGGAGAAACTGA AAATAGTTTATATAGGAAGATTTCTTTTGGAAAAAGGTGTAAATGACTTGCCAATAATTTCATTTTATTTGAATCTAGCG GGCATAAAACATACAATTACAGCATATGGCAAACATGACCCTTCAAATTCTTCTTCTTTAACACTTGATGAAATAAAAAA ACTTGAGACTGAAGATCTTAAATTTAAATCTTCTAGACCTTTCCAAGAAGTTTTTAAAGATTCTCATATATTTTTGTTCC CAAGTGCTCGAGAAGGTCATCCAAGATTTGTCCTTGAGTCTATGGCATATCAATGTATTCCAATTGTCTCACCAAATCCA GGCTTGGATGTTGATGTCGTTCATCTTTTTAATGGGATTGTATCTTCTACTTCATCTCCATCATCTTTGGCAGGATCTGT GATTAGGTTAGTTAAAGATGAAAAACTTTATAATAAAATTAAGCATGGATGCAAAATTTATACCGAAGAAATAACTAAAA TATCAACATGGAGAACTAATTTAGAAGAAATATTTTCTCAATAA
Upstream 100 bases:
>100_bases TAACAAAGAATATAATTGTCAAAATAAATAAATTGTATAAATACTTAATTTTTAATAAAAAACTTATTAGGCTAATATAA AAAAGTAGTTGAATTTTATA
Downstream 100 bases:
>100_bases TAATGAATTTCTTTTATCTTCTGCTAGTAATTTTTACTTTTATAAGTTCATATTTAATAACACCAAAAATTATAAATTTT GCTAAGAATAGAAAGATATT
Product: glycosyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MKNLIISANSLSFILDYKLQLISSLLKKDRDINLYVLIPDKTHEKYQEDNFLEFKSLVPDKNIFYCLKKGTSPLALINNI FWFINISRKLPQNGKCYFVSHTATINIALFFFSFIYKNKRNFVYRFFITGFGPSRIRKSLRSRLIGRVYIKIMQLSSQLN KNKVFVLNTQDRETIQDYKPFRKVYVIRESGLLLENLIKIYNMQIIKPPLEKLKIVYIGRFLLEKGVNDLPIISFYLNLA GIKHTITAYGKHDPSNSSSLTLDEIKKLETEDLKFKSSRPFQEVFKDSHIFLFPSAREGHPRFVLESMAYQCIPIVSPNP GLDVDVVHLFNGIVSSTSSPSSLAGSVIRLVKDEKLYNKIKHGCKIYTEEITKISTWRTNLEEIFSQ
Sequences:
>Translated_387_residues MKNLIISANSLSFILDYKLQLISSLLKKDRDINLYVLIPDKTHEKYQEDNFLEFKSLVPDKNIFYCLKKGTSPLALINNI FWFINISRKLPQNGKCYFVSHTATINIALFFFSFIYKNKRNFVYRFFITGFGPSRIRKSLRSRLIGRVYIKIMQLSSQLN KNKVFVLNTQDRETIQDYKPFRKVYVIRESGLLLENLIKIYNMQIIKPPLEKLKIVYIGRFLLEKGVNDLPIISFYLNLA GIKHTITAYGKHDPSNSSSLTLDEIKKLETEDLKFKSSRPFQEVFKDSHIFLFPSAREGHPRFVLESMAYQCIPIVSPNP GLDVDVVHLFNGIVSSTSSPSSLAGSVIRLVKDEKLYNKIKHGCKIYTEEITKISTWRTNLEEIFSQ >Mature_387_residues MKNLIISANSLSFILDYKLQLISSLLKKDRDINLYVLIPDKTHEKYQEDNFLEFKSLVPDKNIFYCLKKGTSPLALINNI FWFINISRKLPQNGKCYFVSHTATINIALFFFSFIYKNKRNFVYRFFITGFGPSRIRKSLRSRLIGRVYIKIMQLSSQLN KNKVFVLNTQDRETIQDYKPFRKVYVIRESGLLLENLIKIYNMQIIKPPLEKLKIVYIGRFLLEKGVNDLPIISFYLNLA GIKHTITAYGKHDPSNSSSLTLDEIKKLETEDLKFKSSRPFQEVFKDSHIFLFPSAREGHPRFVLESMAYQCIPIVSPNP GLDVDVVHLFNGIVSSTSSPSSLAGSVIRLVKDEKLYNKIKHGCKIYTEEITKISTWRTNLEEIFSQ
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44911; Mature: 44911
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLIISANSLSFILDYKLQLISSLLKKDRDINLYVLIPDKTHEKYQEDNFLEFKSLVPD CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCHHHHHCCCC KNIFYCLKKGTSPLALINNIFWFINISRKLPQNGKCYFVSHTATINIALFFFSFIYKNKR CCEEEEEECCCCHHHHHHHEEEEEEEHHCCCCCCCEEEEEECCEEHHHHHHHHHHHHCCC NFVYRFFITGFGPSRIRKSLRSRLIGRVYIKIMQLSSQLNKNKVFVLNTQDRETIQDYKP CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCC FRKVYVIRESGLLLENLIKIYNMQIIKPPLEKLKIVYIGRFLLEKGVNDLPIISFYLNLA HHEEEEEECCCHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH GIKHTITAYGKHDPSNSSSLTLDEIKKLETEDLKFKSSRPFQEVFKDSHIFLFPSAREGH CHHHEEEECCCCCCCCCCCEEHHHHHHCCHHCCCCCCCCCHHHHHCCCCEEEEECCCCCC PRFVLESMAYQCIPIVSPNPGLDVDVVHLFNGIVSSTSSPSSLAGSVIRLVKDEKLYNKI HHHHHHHCCHHEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH KHGCKIYTEEITKISTWRTNLEEIFSQ HHHHEEEHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure MKNLIISANSLSFILDYKLQLISSLLKKDRDINLYVLIPDKTHEKYQEDNFLEFKSLVPD CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCHHHHHCCCC KNIFYCLKKGTSPLALINNIFWFINISRKLPQNGKCYFVSHTATINIALFFFSFIYKNKR CCEEEEEECCCCHHHHHHHEEEEEEEHHCCCCCCCEEEEEECCEEHHHHHHHHHHHHCCC NFVYRFFITGFGPSRIRKSLRSRLIGRVYIKIMQLSSQLNKNKVFVLNTQDRETIQDYKP CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCC FRKVYVIRESGLLLENLIKIYNMQIIKPPLEKLKIVYIGRFLLEKGVNDLPIISFYLNLA HHEEEEEECCCHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH GIKHTITAYGKHDPSNSSSLTLDEIKKLETEDLKFKSSRPFQEVFKDSHIFLFPSAREGH CHHHEEEECCCCCCCCCCCEEHHHHHHCCHHCCCCCCCCCHHHHHCCCCEEEEECCCCCC PRFVLESMAYQCIPIVSPNPGLDVDVVHLFNGIVSSTSSPSSLAGSVIRLVKDEKLYNKI HHHHHHHCCHHEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH KHGCKIYTEEITKISTWRTNLEEIFSQ HHHHEEEHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA