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The map label for this gene is 78779653

Identifier: 78779653

GI number: 78779653

Start: 1180632

End: 1181288

Strand: Reverse

Name: 78779653

Synonym: PMT9312_1270

Alternate gene names: NA

Gene position: 1181288-1180632 (Counterclockwise)

Preceding gene: 78779654

Following gene: 78779650

Centisome position: 69.11

GC content: 27.85

Gene sequence:

>657_bases
ATGGAGAATTCAAGACAAATTAATTGTAAGGAGATTTTTCGAAAGGCTTATGAAAATAGGTACACCTGGAAGAATGATTT
TAATGGGTACCAAGGTAAATGTATTTTTTTGCGTAATAATAATATTTTTAAAGGTAACTTCGTATTAGGTAAGGACTTTA
AACCAAATATTCAAAAAATAGAAGATGAGAAAATTGTTAAAAGTATTGCCTCTCAGTTATTTGAAGTATGCATACACAGG
GTAAAGAGAGAATTCGAATCTGTTCATTCAGATAATAATTTTAATTTACTCAAAAATACTTTAAGTGGGATTGAAATGAG
TGTTTCAGGAAAGAATCAAGGTGATAGGTATAGAGTTAAAAATGACTGTATTAATATGGTCTATAGAAAAATTCATGGAA
CAATAATTGAAATTTTTGTTGAAGAATTCTTACATACAGGTATAGGTTCCCTTAGTAAAAAATACAGTAGTCAGTCAATT
GATCCAGATACACTTATGGCAAAATCACAAAAATTAGAATATGAGGATGAATTTATAAATATAGGTGAAGAGGAGGATTA
TTGGATCTTAAATTCGAGAACAATAAAATACTTAAACCAAAATCAAGAAGAAGAAACACAAAAGTTTGTTTTCGAGGATT
TAAGTTTATTGAAATAA

Upstream 100 bases:

>100_bases
AAACGCAAAAATTACACAAAAATAGTTCAATCTGATAAAAAACCTCTCCTCTAGTAGGGAGGTTTTTTTTTGTAGAATTA
TTTCACTTATTAAAAATTTA

Downstream 100 bases:

>100_bases
GTTTTTTTATTCAACCAATCTAAATCCTTTATCAAGTAGTTTTTGATAAAGGAGTCTCGCTCTGAAGGCTAAAATTTGTT
CTTCATTTTCATTACTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MENSRQINCKEIFRKAYENRYTWKNDFNGYQGKCIFLRNNNIFKGNFVLGKDFKPNIQKIEDEKIVKSIASQLFEVCIHR
VKREFESVHSDNNFNLLKNTLSGIEMSVSGKNQGDRYRVKNDCINMVYRKIHGTIIEIFVEEFLHTGIGSLSKKYSSQSI
DPDTLMAKSQKLEYEDEFINIGEEEDYWILNSRTIKYLNQNQEEETQKFVFEDLSLLK

Sequences:

>Translated_218_residues
MENSRQINCKEIFRKAYENRYTWKNDFNGYQGKCIFLRNNNIFKGNFVLGKDFKPNIQKIEDEKIVKSIASQLFEVCIHR
VKREFESVHSDNNFNLLKNTLSGIEMSVSGKNQGDRYRVKNDCINMVYRKIHGTIIEIFVEEFLHTGIGSLSKKYSSQSI
DPDTLMAKSQKLEYEDEFINIGEEEDYWILNSRTIKYLNQNQEEETQKFVFEDLSLLK
>Mature_218_residues
MENSRQINCKEIFRKAYENRYTWKNDFNGYQGKCIFLRNNNIFKGNFVLGKDFKPNIQKIEDEKIVKSIASQLFEVCIHR
VKREFESVHSDNNFNLLKNTLSGIEMSVSGKNQGDRYRVKNDCINMVYRKIHGTIIEIFVEEFLHTGIGSLSKKYSSQSI
DPDTLMAKSQKLEYEDEFINIGEEEDYWILNSRTIKYLNQNQEEETQKFVFEDLSLLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25772; Mature: 25772

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSRQINCKEIFRKAYENRYTWKNDFNGYQGKCIFLRNNNIFKGNFVLGKDFKPNIQKI
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEECCEEECCCCCCCHHHH
EDEKIVKSIASQLFEVCIHRVKREFESVHSDNNFNLLKNTLSGIEMSVSGKNQGDRYRVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCCCCCHHH
NDCINMVYRKIHGTIIEIFVEEFLHTGIGSLSKKYSSQSIDPDTLMAKSQKLEYEDEFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHC
IGEEEDYWILNSRTIKYLNQNQEEETQKFVFEDLSLLK
CCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MENSRQINCKEIFRKAYENRYTWKNDFNGYQGKCIFLRNNNIFKGNFVLGKDFKPNIQKI
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEECCEEECCCCCCCHHHH
EDEKIVKSIASQLFEVCIHRVKREFESVHSDNNFNLLKNTLSGIEMSVSGKNQGDRYRVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCCCCCHHH
NDCINMVYRKIHGTIIEIFVEEFLHTGIGSLSKKYSSQSIDPDTLMAKSQKLEYEDEFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHC
IGEEEDYWILNSRTIKYLNQNQEEETQKFVFEDLSLLK
CCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA