Click here to switch to the map view.

The map label for this gene is 78779608

Identifier: 78779608

GI number: 78779608

Start: 1143167

End: 1143589

Strand: Reverse

Name: 78779608

Synonym: PMT9312_1225

Alternate gene names: NA

Gene position: 1143589-1143167 (Counterclockwise)

Preceding gene: 78779609

Following gene: 78779605

Centisome position: 66.91

GC content: 34.52

Gene sequence:

>423_bases
ATGAAATTAAAAAAATTTATTCCATTATGTTTCCTTTTTATTGGGACTTTAGCCTTACCATACCCATCTCTTGCTGATGA
AAAGATTGAAGTTATACCTATTATTCAAAGTTCAAAAGGACTTAGTGGTAAAAATTTTAATTATCTCGAGGGTAAGCCTG
AATTAAGACTTTTAAAAGTAAAGATTCCAGTTGGCTTGAAAACTCCAATTCATACTCATCCTTCCCCAATGTTGATTCAT
GTCACCAGAGGAAGATTAAAACATGTGAGGGGTGAAGAAATTAATTTTTTTAAAGCGGGTGATGCATTTATAGAGAGTAA
TAATGGGGGCCCCCACTATGTGAAGAATGTTGGAAAGAAGCCGGTCATACTTCATGTGGGAGTTGTATCTGTAGTTGGAA
TGCCTACGACCATAAATAAATAA

Upstream 100 bases:

>100_bases
ATTTAAGAGAGGAAATAAAGCAATTAGAAAAGTTATATAAAAAATAAATTAGTTTATTATTTTTGCAAACTACCTATTAT
TAGTGAAACTTAAATATCTA

Downstream 100 bases:

>100_bases
TATTTTTCTGTAATTTGTTCAATCTGCATTTTTAGGATTCACCTTTTACGAAGAACAACTGTAATGAGATACTCCTCCAT
AGTTAAAATACTGGCTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKLKKFIPLCFLFIGTLALPYPSLADEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKVKIPVGLKTPIHTHPSPMLIH
VTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKKPVILHVGVVSVVGMPTTINK

Sequences:

>Translated_140_residues
MKLKKFIPLCFLFIGTLALPYPSLADEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKVKIPVGLKTPIHTHPSPMLIH
VTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKKPVILHVGVVSVVGMPTTINK
>Mature_140_residues
MKLKKFIPLCFLFIGTLALPYPSLADEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKVKIPVGLKTPIHTHPSPMLIH
VTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKKPVILHVGVVSVVGMPTTINK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15459; Mature: 15459

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKKFIPLCFLFIGTLALPYPSLADEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCEEEEEE
KIPVGLKTPIHTHPSPMLIHVTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKK
EECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCHHHHHCCCC
PVILHVGVVSVVGMPTTINK
CEEEEECHHHHCCCCCCCCC
>Mature Secondary Structure
MKLKKFIPLCFLFIGTLALPYPSLADEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKV
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCEEEEEE
KIPVGLKTPIHTHPSPMLIHVTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKK
EECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCHHHHHCCCC
PVILHVGVVSVVGMPTTINK
CEEEEECHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA