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The map label for this gene is 78779564

Identifier: 78779564

GI number: 78779564

Start: 1096012

End: 1097832

Strand: Reverse

Name: 78779564

Synonym: PMT9312_1181

Alternate gene names: NA

Gene position: 1097832-1096012 (Counterclockwise)

Preceding gene: 78779567

Following gene: 78779561

Centisome position: 64.23

GC content: 25.43

Gene sequence:

>1821_bases
ATGGAAGGGTTTTTGAAAAAAAGTTTAAAAATATATTTAAAAATATATTTAAAAATCTTTTTATTAAGCACCTTCTTAGG
ATCTCAATCTTATTCGTCCACTAATCCAGAGTTTTTAAGTAATTCCTTTGATAAGAAAGATATTAAATCATATCAATTTA
AAAGAATTTCCAAAAATAATAATGTGACTAAAGTAAGTGAAAAATCACAAATGGATGAGATTTCAATCAAATCTTTAGAA
TTTGATGATTTAATAAATTTGATTGATGAAAACAACTTAGAGCTTAAGGCGGAAAAAATAAAATTGGAACAAGCTCAAAA
TAATTTATCAATTGTGAAATCTGAATTAAAACCTTCTATACAGATATCTACTGATGGGATCCCAAAATATTCGATAGGAA
AAGGTGATAATCCTAAAAAAGAAACGAGTGAATTAAAAGGTTCTTTATCAGCTACTGTAAGTTATAAATTATATGATCCG
GAAAAATCTCAAAATGTAATTCTCTCAGAAAATCAACTATCAAAAGCTAAATTAGAATTCAATATTTTTAGGGATGCATT
AATTTCTAGAGCTCAAAAGTTTTTTGTAGAATTGCAATTAGCATATGAAAAGGTTGAAATTGCCCAAAAAGCTTTTTTGT
TGTCAGGATCTAGTCTCGATGATGCAAAAATATTAAATAAAGCATTATTAGTTTCAGATATTGAAGTTTTAGAGGCTGAA
AGTCAATTGTCTAGAGATATGAAATTTCTAAATGATAAAAAAAATGAACTTGAATTAATAATTAATTCCCTAAGTGAAAT
TATTGGAGTTAATAAAAAAGATATCAGAAAATTTAGATATGCAAATTCGATTATAGGATTTTGGGAAATGGATTTAGATG
AAACTATAGATTTTGCTAAAACAAAAAATAAAAGCTTAGAAAAATTAAATTTAGATCTCAAGATTAGCCATAATAAAAGT
AACAAAGAACTTGGTAAAAGTAAGCCAAAATTTAGTTTGGTTAATAGGCTATCTTCAAATCTTAATCAGGGGCAGTCTAA
TGTTGTCCCTCCTGTTGATTTTGATGAAACTGGAAGTGAATATGAAAATACTATTGCAATTACAGCAAAATGGGATATAT
TCAACGGGGGAAAAAATAGATACATAAGAGAATTCAAGAAAAGTAAATATGATGAATTTAATCTGAGAATAAAAGATGAA
GAAAATAAAATAAAATTTAAAGTTTCAGAAAGCTACAAAACTTTAAAAACCTCTCTCAAAAATATCTTAAATACAAGTAG
CCAAGTAAATAATAATAAAAATATTTTAAAAATTTCGCGATTAAGATTTAATGCAGGAGTTGCTTCACAAAGAGAAATTA
TAAATAATCAAAGAGATCTGACTCAATCACGGATTGTTTATGCTAATTCTATCGCTAACTATAATAAGAATTTAATAGAT
CTCAAAAATATTACTAACTTAGGCTCCTTAAAAAAATGTGTCATTAATGAAGAATTAGTTGCCAAATCTTACACATTTGA
AAAAGAGATTGATTTAAGCATTGCATGTCAAATACCTTTCAATAAAGAAGGTCAATTTTCTTATAAAACTAAAGAATTTA
AATTGTATAAAAATAACATAAATAAAATTATGAATGATAAAAATTCTAATTTTAAATCAAAAGATTCGGATGACAAAAAT
ATTAAAAAACAACCTAAAGAAGATCTATCGAATGAAGAGAAGGTATTTTCTGATAGAAGTGATTCTTATGATTCACATGA
ATCATGTGAGGATATAAAAAATCCTCAAACTCAGAAAAATTGCTTTGATTCATACTTATAA

Upstream 100 bases:

>100_bases
TACTAATTTCTTTAATAAATAATTTTATTAAAAGATTTGTAAGATAACAAATGAAATATCTATTGCCATTGAGAAAGTAG
CAACTAAAATTGATGTATAT

Downstream 100 bases:

>100_bases
ATATTTAATTTAATAGATAATTAGTTTTTAGAGTTAAGAAATTTATTGAGAGAAACTACGTGTTATGTGTCATAAAATTT
TTGATTGATAGTCGATCAAA

Product: Outer membrane protein-like

Products: NA

Alternate protein names: RND Family Outer Membrane Efflux Protein; Outer Membrane Protein-Like; RND Family Outer Membrane Efflux Protein-Like

Number of amino acids: Translated: 606; Mature: 606

Protein sequence:

>606_residues
MEGFLKKSLKIYLKIYLKIFLLSTFLGSQSYSSTNPEFLSNSFDKKDIKSYQFKRISKNNNVTKVSEKSQMDEISIKSLE
FDDLINLIDENNLELKAEKIKLEQAQNNLSIVKSELKPSIQISTDGIPKYSIGKGDNPKKETSELKGSLSATVSYKLYDP
EKSQNVILSENQLSKAKLEFNIFRDALISRAQKFFVELQLAYEKVEIAQKAFLLSGSSLDDAKILNKALLVSDIEVLEAE
SQLSRDMKFLNDKKNELELIINSLSEIIGVNKKDIRKFRYANSIIGFWEMDLDETIDFAKTKNKSLEKLNLDLKISHNKS
NKELGKSKPKFSLVNRLSSNLNQGQSNVVPPVDFDETGSEYENTIAITAKWDIFNGGKNRYIREFKKSKYDEFNLRIKDE
ENKIKFKVSESYKTLKTSLKNILNTSSQVNNNKNILKISRLRFNAGVASQREIINNQRDLTQSRIVYANSIANYNKNLID
LKNITNLGSLKKCVINEELVAKSYTFEKEIDLSIACQIPFNKEGQFSYKTKEFKLYKNNINKIMNDKNSNFKSKDSDDKN
IKKQPKEDLSNEEKVFSDRSDSYDSHESCEDIKNPQTQKNCFDSYL

Sequences:

>Translated_606_residues
MEGFLKKSLKIYLKIYLKIFLLSTFLGSQSYSSTNPEFLSNSFDKKDIKSYQFKRISKNNNVTKVSEKSQMDEISIKSLE
FDDLINLIDENNLELKAEKIKLEQAQNNLSIVKSELKPSIQISTDGIPKYSIGKGDNPKKETSELKGSLSATVSYKLYDP
EKSQNVILSENQLSKAKLEFNIFRDALISRAQKFFVELQLAYEKVEIAQKAFLLSGSSLDDAKILNKALLVSDIEVLEAE
SQLSRDMKFLNDKKNELELIINSLSEIIGVNKKDIRKFRYANSIIGFWEMDLDETIDFAKTKNKSLEKLNLDLKISHNKS
NKELGKSKPKFSLVNRLSSNLNQGQSNVVPPVDFDETGSEYENTIAITAKWDIFNGGKNRYIREFKKSKYDEFNLRIKDE
ENKIKFKVSESYKTLKTSLKNILNTSSQVNNNKNILKISRLRFNAGVASQREIINNQRDLTQSRIVYANSIANYNKNLID
LKNITNLGSLKKCVINEELVAKSYTFEKEIDLSIACQIPFNKEGQFSYKTKEFKLYKNNINKIMNDKNSNFKSKDSDDKN
IKKQPKEDLSNEEKVFSDRSDSYDSHESCEDIKNPQTQKNCFDSYL
>Mature_606_residues
MEGFLKKSLKIYLKIYLKIFLLSTFLGSQSYSSTNPEFLSNSFDKKDIKSYQFKRISKNNNVTKVSEKSQMDEISIKSLE
FDDLINLIDENNLELKAEKIKLEQAQNNLSIVKSELKPSIQISTDGIPKYSIGKGDNPKKETSELKGSLSATVSYKLYDP
EKSQNVILSENQLSKAKLEFNIFRDALISRAQKFFVELQLAYEKVEIAQKAFLLSGSSLDDAKILNKALLVSDIEVLEAE
SQLSRDMKFLNDKKNELELIINSLSEIIGVNKKDIRKFRYANSIIGFWEMDLDETIDFAKTKNKSLEKLNLDLKISHNKS
NKELGKSKPKFSLVNRLSSNLNQGQSNVVPPVDFDETGSEYENTIAITAKWDIFNGGKNRYIREFKKSKYDEFNLRIKDE
ENKIKFKVSESYKTLKTSLKNILNTSSQVNNNKNILKISRLRFNAGVASQREIINNQRDLTQSRIVYANSIANYNKNLID
LKNITNLGSLKKCVINEELVAKSYTFEKEIDLSIACQIPFNKEGQFSYKTKEFKLYKNNINKIMNDKNSNFKSKDSDDKN
IKKQPKEDLSNEEKVFSDRSDSYDSHESCEDIKNPQTQKNCFDSYL

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69669; Mature: 69669

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGFLKKSLKIYLKIYLKIFLLSTFLGSQSYSSTNPEFLSNSFDKKDIKSYQFKRISKNN
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCC
NVTKVSEKSQMDEISIKSLEFDDLINLIDENNLELKAEKIKLEQAQNNLSIVKSELKPSI
CEEEEHHHHHHCHHHHCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHCHHHHHHHHCCCCE
QISTDGIPKYSIGKGDNPKKETSELKGSLSATVSYKLYDPEKSQNVILSENQLSKAKLEF
EEECCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEECCCCCHHHHHH
NIFRDALISRAQKFFVELQLAYEKVEIAQKAFLLSGSSLDDAKILNKALLVSDIEVLEAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SQLSRDMKFLNDKKNELELIINSLSEIIGVNKKDIRKFRYANSIIGFWEMDLDETIDFAK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCHHHHHHHHH
TKNKSLEKLNLDLKISHNKSNKELGKSKPKFSLVNRLSSNLNQGQSNVVPPVDFDETGSE
HCCCCHHHEEEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
YENTIAITAKWDIFNGGKNRYIREFKKSKYDEFNLRIKDEENKIKFKVSESYKTLKTSLK
CCCEEEEEEEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECHHHHHHHHHHH
NILNTSSQVNNNKNILKISRLRFNAGVASQREIINNQRDLTQSRIVYANSIANYNKNLID
HHHCCHHHCCCCCCEEEEEEEEECCCCCHHHHHHCCHHHHHHHHEEEEHHHHHCCCCEEE
LKNITNLGSLKKCVINEELVAKSYTFEKEIDLSIACQIPFNKEGQFSYKTKEFKLYKNNI
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHH
NKIMNDKNSNFKSKDSDDKNIKKQPKEDLSNEEKVFSDRSDSYDSHESCEDIKNPQTQKN
HHHHCCCCCCCCCCCCCCCHHHCCCHHHCCCHHHHHCCCCCCCCCHHHHHHHCCCCHHHH
CFDSYL
HHHCCC
>Mature Secondary Structure
MEGFLKKSLKIYLKIYLKIFLLSTFLGSQSYSSTNPEFLSNSFDKKDIKSYQFKRISKNN
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCC
NVTKVSEKSQMDEISIKSLEFDDLINLIDENNLELKAEKIKLEQAQNNLSIVKSELKPSI
CEEEEHHHHHHCHHHHCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHCHHHHHHHHCCCCE
QISTDGIPKYSIGKGDNPKKETSELKGSLSATVSYKLYDPEKSQNVILSENQLSKAKLEF
EEECCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEECCCCCHHHHHH
NIFRDALISRAQKFFVELQLAYEKVEIAQKAFLLSGSSLDDAKILNKALLVSDIEVLEAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SQLSRDMKFLNDKKNELELIINSLSEIIGVNKKDIRKFRYANSIIGFWEMDLDETIDFAK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCHHHHHHHHH
TKNKSLEKLNLDLKISHNKSNKELGKSKPKFSLVNRLSSNLNQGQSNVVPPVDFDETGSE
HCCCCHHHEEEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
YENTIAITAKWDIFNGGKNRYIREFKKSKYDEFNLRIKDEENKIKFKVSESYKTLKTSLK
CCCEEEEEEEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECHHHHHHHHHHH
NILNTSSQVNNNKNILKISRLRFNAGVASQREIINNQRDLTQSRIVYANSIANYNKNLID
HHHCCHHHCCCCCCEEEEEEEEECCCCCHHHHHHCCHHHHHHHHEEEEHHHHHCCCCEEE
LKNITNLGSLKKCVINEELVAKSYTFEKEIDLSIACQIPFNKEGQFSYKTKEFKLYKNNI
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHH
NKIMNDKNSNFKSKDSDDKNIKKQPKEDLSNEEKVFSDRSDSYDSHESCEDIKNPQTQKN
HHHHCCCCCCCCCCCCCCCHHHCCCHHHCCCHHHHHCCCCCCCCCHHHHHHHCCCCHHHH
CFDSYL
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA