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The map label for this gene is 78779530

Identifier: 78779530

GI number: 78779530

Start: 1061228

End: 1061812

Strand: Reverse

Name: 78779530

Synonym: PMT9312_1147

Alternate gene names: NA

Gene position: 1061812-1061228 (Counterclockwise)

Preceding gene: 78779531

Following gene: 78779529

Centisome position: 62.12

GC content: 34.36

Gene sequence:

>585_bases
ATGAGCCAAATTCTTGAGATCCTTGAAAGTGATTATTTATCAGACGCCGTGACAACTTTTAGCATAAGTGACTGTTCTGA
ACTAGAACATGGAGCATTTTTAGAAGGTAAATCGACGGCCACTTGGTATCCAAATTTTGAAGAAGATGATTTTGATACTG
TAGAAGTAATAGCTGAAGCTAAAGTTGCCTCAGTATTGCATCAAGGCTATTCTCCCCAAACAATAGAGTTATGGTTAGAT
AATCATTCTGATGATTTCAACAGTGCAGGAGCATTGCTTTGTGAATTACTTGATTGGGATAGTGAGAGCTTAGATGAAGA
GATAAAAACCTGCTCTACAAGAATAATAATCTTAGAAAAATTCGAAGTTAAAGAAAAATATAGGAATAAAGGATTAGGGA
AATTTCTTGCCAGAAAAATTCTTTATAGCGCAGCAGCAAAAGGTGAGTGTGTAGTGGTTCAACCTGATCTTGGTAAAGAG
AATGGAAATGAACCTGAAAGACTTATAAAGTTTTGGCTTGGTCTAGATAAGGGAATGAAATATTCATCTAAATTCAATTC
TATGTATACGAGTATTTTTGAATAA

Upstream 100 bases:

>100_bases
AAAAGATATTTATTCATTGATGCAGAAATATAAAGATATTGATCAAGATCTTCTTAGAAAGGCCCTCGGAGAGGAGGAAA
CTTAAAAAAATTAAAGTAAT

Downstream 100 bases:

>100_bases
TAAATGATACCGAAATCAAAAATTAAATTTTATAGACTACTTAAAGAACATTCTGGAACTTGGTCTGGATCAAATCGAGC
AGATATTCATACTATCTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSQILEILESDYLSDAVTTFSISDCSELEHGAFLEGKSTATWYPNFEEDDFDTVEVIAEAKVASVLHQGYSPQTIELWLD
NHSDDFNSAGALLCELLDWDSESLDEEIKTCSTRIIILEKFEVKEKYRNKGLGKFLARKILYSAAAKGECVVVQPDLGKE
NGNEPERLIKFWLGLDKGMKYSSKFNSMYTSIFE

Sequences:

>Translated_194_residues
MSQILEILESDYLSDAVTTFSISDCSELEHGAFLEGKSTATWYPNFEEDDFDTVEVIAEAKVASVLHQGYSPQTIELWLD
NHSDDFNSAGALLCELLDWDSESLDEEIKTCSTRIIILEKFEVKEKYRNKGLGKFLARKILYSAAAKGECVVVQPDLGKE
NGNEPERLIKFWLGLDKGMKYSSKFNSMYTSIFE
>Mature_193_residues
SQILEILESDYLSDAVTTFSISDCSELEHGAFLEGKSTATWYPNFEEDDFDTVEVIAEAKVASVLHQGYSPQTIELWLDN
HSDDFNSAGALLCELLDWDSESLDEEIKTCSTRIIILEKFEVKEKYRNKGLGKFLARKILYSAAAKGECVVVQPDLGKEN
GNEPERLIKFWLGLDKGMKYSSKFNSMYTSIFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21965; Mature: 21834

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQILEILESDYLSDAVTTFSISDCSELEHGAFLEGKSTATWYPNFEEDDFDTVEVIAEA
CHHHHHHHHHHHHHHHHHEEECCCHHHHCCCCEECCCCCEEECCCCCCCCCHHHHHHHHH
KVASVLHQGYSPQTIELWLDNHSDDFNSAGALLCELLDWDSESLDEEIKTCSTRIIILEK
HHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEH
FEVKEKYRNKGLGKFLARKILYSAAAKGECVVVQPDLGKENGNEPERLIKFWLGLDKGMK
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
YSSKFNSMYTSIFE
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SQILEILESDYLSDAVTTFSISDCSELEHGAFLEGKSTATWYPNFEEDDFDTVEVIAEA
HHHHHHHHHHHHHHHHHEEECCCHHHHCCCCEECCCCCEEECCCCCCCCCHHHHHHHHH
KVASVLHQGYSPQTIELWLDNHSDDFNSAGALLCELLDWDSESLDEEIKTCSTRIIILEK
HHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEH
FEVKEKYRNKGLGKFLARKILYSAAAKGECVVVQPDLGKENGNEPERLIKFWLGLDKGMK
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
YSSKFNSMYTSIFE
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA