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The map label for this gene is dnaJ [H]

Identifier: 78779521

GI number: 78779521

Start: 1053894

End: 1054415

Strand: Reverse

Name: dnaJ [H]

Synonym: PMT9312_1138

Alternate gene names: 78779521

Gene position: 1054415-1053894 (Counterclockwise)

Preceding gene: 78779522

Following gene: 78779519

Centisome position: 61.69

GC content: 30.46

Gene sequence:

>522_bases
TTGACAAAAGACATAGCTTATTATTTATTGATTTTAGGTTTACAATCCGATTTTGACGAGAATGAACTAAAGCAAGCATA
TAGAAAAGAGGCTAAGAAATGGCATCCTGATTTAAATAAAAATGATGTTAATGCCGAAGAAAGGTTAAAGCTAATAAATG
ATGCATATGAATTTCTAAGTGGTTATAAAAAACAAGAATTTACTAAAGTTGAAAATATTAGTGTCAACGATATAAACAAA
AAATCAACCAAGAGAAATGATGATAGCGTTAGTTCACAAAATAAGAATTCAAGGAAAGAAAAGGCTAAAGGAAAAGATCA
AGTTGCTTTGATGAGTTTAGTTGTGTATGTTTCTGTGGCATTAATTCTTCTATTCGCCATAATTACTCGAGCAAGCAAAA
GAAATATTTGTTATGCATGGGCAACGTCTGATCTTAGTGATAAAGAGGCAGCTAAAAAACTAGGTGTCAAGGATGCAGCG
GTATATTGTTTTTTTAAGGAAAGCATAAATAAAAAAGGATAA

Upstream 100 bases:

>100_bases
ACCTAGTGCTACATAGGTACCAGGTCTCATCTTTTTACAGTGGTTCAAGTTGACAGTCGATCTAACATAGAGGGATAAAA
ACTTTCTTTTTAGGAATTAT

Downstream 100 bases:

>100_bases
GAGTTTTTTGTGAATATTACAAAAACTGAATAAGAAACAAAACGCTTACTTCTAGCACTACTAGCAGCTCAAGCTTTAAC
TACTGCTGTTGTTGTCTAAT

Product: heat shock protein DnaJ-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTKDIAYYLLILGLQSDFDENELKQAYRKEAKKWHPDLNKNDVNAEERLKLINDAYEFLSGYKKQEFTKVENISVNDINK
KSTKRNDDSVSSQNKNSRKEKAKGKDQVALMSLVVYVSVALILLFAIITRASKRNICYAWATSDLSDKEAAKKLGVKDAA
VYCFFKESINKKG

Sequences:

>Translated_173_residues
MTKDIAYYLLILGLQSDFDENELKQAYRKEAKKWHPDLNKNDVNAEERLKLINDAYEFLSGYKKQEFTKVENISVNDINK
KSTKRNDDSVSSQNKNSRKEKAKGKDQVALMSLVVYVSVALILLFAIITRASKRNICYAWATSDLSDKEAAKKLGVKDAA
VYCFFKESINKKG
>Mature_172_residues
TKDIAYYLLILGLQSDFDENELKQAYRKEAKKWHPDLNKNDVNAEERLKLINDAYEFLSGYKKQEFTKVENISVNDINKK
STKRNDDSVSSQNKNSRKEKAKGKDQVALMSLVVYVSVALILLFAIITRASKRNICYAWATSDLSDKEAAKKLGVKDAAV
YCFFKESINKKG

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 19772; Mature: 19641

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKDIAYYLLILGLQSDFDENELKQAYRKEAKKWHPDLNKNDVNAEERLKLINDAYEFLS
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GYKKQEFTKVENISVNDINKKSTKRNDDSVSSQNKNSRKEKAKGKDQVALMSLVVYVSVA
HHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHH
LILLFAIITRASKRNICYAWATSDLSDKEAAKKLGVKDAAVYCFFKESINKKG
HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TKDIAYYLLILGLQSDFDENELKQAYRKEAKKWHPDLNKNDVNAEERLKLINDAYEFLS
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GYKKQEFTKVENISVNDINKKSTKRNDDSVSSQNKNSRKEKAKGKDQVALMSLVVYVSVA
HHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHH
LILLFAIITRASKRNICYAWATSDLSDKEAAKKLGVKDAAVYCFFKESINKKG
HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA