Click here to switch to the map view.

The map label for this gene is 78779514

Identifier: 78779514

GI number: 78779514

Start: 1045860

End: 1046975

Strand: Reverse

Name: 78779514

Synonym: PMT9312_1131

Alternate gene names: NA

Gene position: 1046975-1045860 (Counterclockwise)

Preceding gene: 78779515

Following gene: 78779513

Centisome position: 61.26

GC content: 42.38

Gene sequence:

>1116_bases
ATGAAGCTTTTCAAAAGCTTGCTAGTAGCACCAGCCACTTTAGGACTTCTAGCTCCTATGGCTGCTACAGCAAACGAAGT
CACTATTAATGACTTTAACCCTGCTGAAGAACTTGCTATTACAAATAGCCGCGTAGATGGTTTAGAAGCAAGATTTAATA
ACTTTGAAGCTGGTAGCTTCTCAGAAACAACATCAGCATCTTTCTCTGTTGACTTCGCCATTGGTTCTAACGATGACGAT
GACGCAGGTGTTGATACAGACGATGCTGTCCAAGCTGGTTACGCTTTCCAGATCGATCTAAATACAAGTTTTACAGGTGA
AGATTCACTTGACATCGCTATAGACGCTGGTAACCCAGGTGCTGGCAGTATTAACGATCTATTAGACTTAAACTCAGCTG
GCGATGGCCTTACTGTTGATGGCGTAACTTACACTTTCCCAGTTGGCGACAAAGCAACAGCTTTCTTCGGTCAAAATACT
GATGGTAACAAGCTATTTACTCAAGCTTGTGTATACGGTGGACCAAGTGACTTGCTAGATGATTGCGGAAACGTAAATGC
TGGAATCACTGGTGGTGCAGTAGGTCTTGGAGGTTCTTATGACTTCGGTAATGGCTTTACAATGGCTGCCGGAGCTCAAA
CAGTACAAGCTAATGTATTCACTGAAGAGGGTGATGATCAATACGCAATTAACGCAGCTTATACAGCTGATAAGTACGCT
CTTTCAGTAACCTATGGTGTTGATGAAAATGCCGCTCTAACAGACGAGAATAAATTCACAGCACTGCAGGCTTACTACAC
TCCTGATGGTAATCTTCCTTCAATAAGTGTTGGTTATGAATTCGGAGACATAGGTGGAGCAGCAGATGGTGCTGATGAAC
AGTCAAGCTTCTTTGTTGGTTTAACATGGGCTGAAGTAGGTCCAGGATCTGCTGGAATTGCTGCTGGTCACAGTAATACT
AATGAAAGTGCTGATGAGTTGTATCAGTACGAAGCATACTATGCTTACCCAGTAAACGATAGTATGACAATTACTCCATT
AATCTATACTCAAGATGCTGCGGGTGATTTAGATGACACAACTGGAATGATGGTCAAGACATCATTCAAATTCTAA

Upstream 100 bases:

>100_bases
ACTGGCACAAATCTTTCAAAAATGTAGTCTTTGATACTTGATTTTGTATGCCCAAATACACTATCTTGAGGTGTACTCTA
AAATTTCGTGTGAGGAATTT

Downstream 100 bases:

>100_bases
ATTTATTAGTTTAATTTAGAAACCTCCAATACACAGAAAAGACCTGCTTATGCAGGTCTTTTTTTGTCTTCAAAGGGACA
AATTTCTTTTTGTCTATAAC

Product: porin precursor-like

Products: NA

Alternate protein names: Porin -Like; Carbohydrate-Selective Porin OprB Family; Porin-Like

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKLFKSLLVAPATLGLLAPMAATANEVTINDFNPAEELAITNSRVDGLEARFNNFEAGSFSETTSASFSVDFAIGSNDDD
DAGVDTDDAVQAGYAFQIDLNTSFTGEDSLDIAIDAGNPGAGSINDLLDLNSAGDGLTVDGVTYTFPVGDKATAFFGQNT
DGNKLFTQACVYGGPSDLLDDCGNVNAGITGGAVGLGGSYDFGNGFTMAAGAQTVQANVFTEEGDDQYAINAAYTADKYA
LSVTYGVDENAALTDENKFTALQAYYTPDGNLPSISVGYEFGDIGGAADGADEQSSFFVGLTWAEVGPGSAGIAAGHSNT
NESADELYQYEAYYAYPVNDSMTITPLIYTQDAAGDLDDTTGMMVKTSFKF

Sequences:

>Translated_371_residues
MKLFKSLLVAPATLGLLAPMAATANEVTINDFNPAEELAITNSRVDGLEARFNNFEAGSFSETTSASFSVDFAIGSNDDD
DAGVDTDDAVQAGYAFQIDLNTSFTGEDSLDIAIDAGNPGAGSINDLLDLNSAGDGLTVDGVTYTFPVGDKATAFFGQNT
DGNKLFTQACVYGGPSDLLDDCGNVNAGITGGAVGLGGSYDFGNGFTMAAGAQTVQANVFTEEGDDQYAINAAYTADKYA
LSVTYGVDENAALTDENKFTALQAYYTPDGNLPSISVGYEFGDIGGAADGADEQSSFFVGLTWAEVGPGSAGIAAGHSNT
NESADELYQYEAYYAYPVNDSMTITPLIYTQDAAGDLDDTTGMMVKTSFKF
>Mature_371_residues
MKLFKSLLVAPATLGLLAPMAATANEVTINDFNPAEELAITNSRVDGLEARFNNFEAGSFSETTSASFSVDFAIGSNDDD
DAGVDTDDAVQAGYAFQIDLNTSFTGEDSLDIAIDAGNPGAGSINDLLDLNSAGDGLTVDGVTYTFPVGDKATAFFGQNT
DGNKLFTQACVYGGPSDLLDDCGNVNAGITGGAVGLGGSYDFGNGFTMAAGAQTVQANVFTEEGDDQYAINAAYTADKYA
LSVTYGVDENAALTDENKFTALQAYYTPDGNLPSISVGYEFGDIGGAADGADEQSSFFVGLTWAEVGPGSAGIAAGHSNT
NESADELYQYEAYYAYPVNDSMTITPLIYTQDAAGDLDDTTGMMVKTSFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38525; Mature: 38525

Theoretical pI: Translated: 3.37; Mature: 3.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFKSLLVAPATLGLLAPMAATANEVTINDFNPAEELAITNSRVDGLEARFNNFEAGSF
CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHEEEECCCCCCHHHHCCCCCCCCC
SETTSASFSVDFAIGSNDDDDAGVDTDDAVQAGYAFQIDLNTSFTGEDSLDIAIDAGNPG
CCCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCC
AGSINDLLDLNSAGDGLTVDGVTYTFPVGDKATAFFGQNTDGNKLFTQACVYGGPSDLLD
CCCHHHHHCCCCCCCCEEECCEEEEEECCCCEEEEECCCCCCCEEEEHHHHCCCCHHHHH
DCGNVNAGITGGAVGLGGSYDFGNGFTMAAGAQTVQANVFTEEGDDQYAINAAYTADKYA
HCCCCCCCCCCCCEECCCCCCCCCCEEEECCCEEEEEEEEECCCCCCEEEEEEEECCEEE
LSVTYGVDENAALTDENKFTALQAYYTPDGNLPSISVGYEFGDIGGAADGADEQSSFFVG
EEEEECCCCCCEECCCCCEEEEEEEECCCCCCCEEEECEEECCCCCCCCCCCCCCCEEEE
LTWAEVGPGSAGIAAGHSNTNESADELYQYEAYYAYPVNDSMTITPLIYTQDAAGDLDDT
EEEHCCCCCCCCEECCCCCCCCCHHHHEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCC
TGMMVKTSFKF
CCEEEEEECCC
>Mature Secondary Structure
MKLFKSLLVAPATLGLLAPMAATANEVTINDFNPAEELAITNSRVDGLEARFNNFEAGSF
CHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHEEEECCCCCCHHHHCCCCCCCCC
SETTSASFSVDFAIGSNDDDDAGVDTDDAVQAGYAFQIDLNTSFTGEDSLDIAIDAGNPG
CCCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCC
AGSINDLLDLNSAGDGLTVDGVTYTFPVGDKATAFFGQNTDGNKLFTQACVYGGPSDLLD
CCCHHHHHCCCCCCCCEEECCEEEEEECCCCEEEEECCCCCCCEEEEHHHHCCCCHHHHH
DCGNVNAGITGGAVGLGGSYDFGNGFTMAAGAQTVQANVFTEEGDDQYAINAAYTADKYA
HCCCCCCCCCCCCEECCCCCCCCCCEEEECCCEEEEEEEEECCCCCCEEEEEEEECCEEE
LSVTYGVDENAALTDENKFTALQAYYTPDGNLPSISVGYEFGDIGGAADGADEQSSFFVG
EEEEECCCCCCEECCCCCEEEEEEEECCCCCCCEEEECEEECCCCCCCCCCCCCCCEEEE
LTWAEVGPGSAGIAAGHSNTNESADELYQYEAYYAYPVNDSMTITPLIYTQDAAGDLDDT
EEEHCCCCCCCCEECCCCCCCCCHHHHEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCC
TGMMVKTSFKF
CCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA