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The map label for this gene is pbsY

Identifier: 78779511

GI number: 78779511

Start: 1042895

End: 1043008

Strand: Reverse

Name: pbsY

Synonym: PMT9312_1128

Alternate gene names: 78779511

Gene position: 1043008-1042895 (Counterclockwise)

Preceding gene: 78779513

Following gene: 78779510

Centisome position: 61.02

GC content: 37.72

Gene sequence:

>114_bases
ATGTTAAGAGCTATTGTCGTTTTTGCCCCAATAATTGCTGCAGTTGCATGGGTTGTTTTCAATATTCAAAAACCAGCAAG
AGAGCAATGGGATAGACAATTCGGAGAGAAATAA

Upstream 100 bases:

>100_bases
ATTGAAATACATTTCTTAACTTATTAACTAAAAAATTAAGAATTCTCTCTTTATTTGAAGTTAATAGGTAAGATATTTTT
AAATAACAGAATTTTTTCAG

Downstream 100 bases:

>100_bases
AAATTAATTAATTGATAGATAAAGAGGTAATTGTAATAGGAGCAGGTCTTGCAGGTTCTGAGGCTGCTTGGCAGATAGCA
AATGCTGGAGTACCAGTTAA

Product: photosystem II protein Y

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 37; Mature: 37

Protein sequence:

>37_residues
MLRAIVVFAPIIAAVAWVVFNIQKPAREQWDRQFGEK

Sequences:

>Translated_37_residues
MLRAIVVFAPIIAAVAWVVFNIQKPAREQWDRQFGEK
>Mature_37_residues
MLRAIVVFAPIIAAVAWVVFNIQKPAREQWDRQFGEK

Specific function: Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbY family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBY_PROM9 (Q31AA8)

Other databases:

- EMBL:   CP000111
- RefSeq:   YP_397623.1
- STRING:   Q31AA8
- GeneID:   3765932
- GenomeReviews:   CP000111_GR
- KEGG:   pmi:PMT9312_1128
- ProtClustDB:   PRK13240
- BioCyc:   PMAR74546:PMT9312_1128-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_00717
- InterPro:   IPR009388

Pfam domain/function: PF06298 PsbY

EC number: NA

Molecular weight: Translated: 4299; Mature: 4299

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11ed2af4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAIVVFAPIIAAVAWVVFNIQKPAREQWDRQFGEK
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH
>Mature Secondary Structure
MLRAIVVFAPIIAAVAWVVFNIQKPAREQWDRQFGEK
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA