Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is yedP [C]

Identifier: 78779223

GI number: 78779223

Start: 776625

End: 777422

Strand: Direct

Name: yedP [C]

Synonym: PMT9312_0839

Alternate gene names: 78779223

Gene position: 776625-777422 (Clockwise)

Preceding gene: 78779222

Following gene: 78779224

Centisome position: 45.44

GC content: 28.7

Gene sequence:

>798_bases
ATGATTGAAGATTCTTCTCTTTGGGTTGTGAGTGATGTCGATGGTACTTTAATGGATCACTCGTATGATTTGACACCTGC
CAAAGAAACTATAAAAATACTAAAAAATAAATCTATACCTGTAATCCTTTGTACAAGCAAGACAGCATCTGAAGTAAAAG
TTATTAGGAAGGAACTAAATTTAACAGATCCCTATATTGTTGAAAATGGTGCAGCAATATATGGTGAATCTCTTAAAAAG
GTTAATGGAGAAATTATCCTTGGAAAAAAATACGAACTTCTTGAAGAAATCTTAAATTTTATTTCTAAAGAAATTGATTA
TAAACTTATTCCTCTCAATAATCTCAATGATCAAGAAGCAACTCAGCTTACAGGTTTGAAAGGCAATTCATTGAACTTAA
TGCGAGATAGACATTGGAGTATGCCTTTTTTAAATCCGCCCAGTTTTTTAGAAGAAAAAATTAATAACTGTTGTAAAAAG
TACAAAGTTGATATCTTTAAGGGAAATAGAATGAGTCACTTATTATCTACAAATTCTAATAAAGGAAAAGCTATAAATGC
TCTTAAAAAATATTCAAATATTCAAAATATTAAAATTATAGGTTTGGGTGATTCTCCAAATGATTTGCCTCTACTTTTAA
ACTCAGATATTAGAATTGTTATCCCAGGAATAGATGGACCTAACCTAAATTTACTAGATCAATTAAAAGATTTTGAATTT
ACTTTAGCTTCTGAGCCTAATGGATATGGTTGGAAAAATGAAATCAATAAATTAATAAATAAGCTAGAACTAATTTAG

Upstream 100 bases:

>100_bases
AATGATTTTAATATGCGAGATTTTTTAACAGCCACTAAATACAATTGGAAAAATATTAGTCTTGATCCTTTTCAAGTTAT
TTGGCTTGGTGGTTTTTAAA

Downstream 100 bases:

>100_bases
AAAAGTGAAACATTTAGATATTAATTTTCCTGTTGATAAATTTGAAAAATTAATTATTGATATTGGTTGGGAATCCTTAG
ATGATTGGTTCAATTTTTGG

Product: mannosyl-3-phosphoglycerate phosphatase

Products: NA

Alternate protein names: MPGP [H]

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MIEDSSLWVVSDVDGTLMDHSYDLTPAKETIKILKNKSIPVILCTSKTASEVKVIRKELNLTDPYIVENGAAIYGESLKK
VNGEIILGKKYELLEEILNFISKEIDYKLIPLNNLNDQEATQLTGLKGNSLNLMRDRHWSMPFLNPPSFLEEKINNCCKK
YKVDIFKGNRMSHLLSTNSNKGKAINALKKYSNIQNIKIIGLGDSPNDLPLLLNSDIRIVIPGIDGPNLNLLDQLKDFEF
TLASEPNGYGWKNEINKLINKLELI

Sequences:

>Translated_265_residues
MIEDSSLWVVSDVDGTLMDHSYDLTPAKETIKILKNKSIPVILCTSKTASEVKVIRKELNLTDPYIVENGAAIYGESLKK
VNGEIILGKKYELLEEILNFISKEIDYKLIPLNNLNDQEATQLTGLKGNSLNLMRDRHWSMPFLNPPSFLEEKINNCCKK
YKVDIFKGNRMSHLLSTNSNKGKAINALKKYSNIQNIKIIGLGDSPNDLPLLLNSDIRIVIPGIDGPNLNLLDQLKDFEF
TLASEPNGYGWKNEINKLINKLELI
>Mature_265_residues
MIEDSSLWVVSDVDGTLMDHSYDLTPAKETIKILKNKSIPVILCTSKTASEVKVIRKELNLTDPYIVENGAAIYGESLKK
VNGEIILGKKYELLEEILNFISKEIDYKLIPLNNLNDQEATQLTGLKGNSLNLMRDRHWSMPFLNPPSFLEEKINNCCKK
YKVDIFKGNRMSHLLSTNSNKGKAINALKKYSNIQNIKIIGLGDSPNDLPLLLNSDIRIVIPGIDGPNLNLLDQLKDFEF
TLASEPNGYGWKNEINKLINKLELI

Specific function: Unknown

COG id: COG3769

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. MPGP family [H]

Homologues:

Organism=Escherichia coli, GI1788265, Length=237, Percent_Identity=30.379746835443, Blast_Score=110, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR006381
- InterPro:   IPR012815 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.70 [H]

Molecular weight: Translated: 29873; Mature: 29873

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEDSSLWVVSDVDGTLMDHSYDLTPAKETIKILKNKSIPVILCTSKTASEVKVIRKELN
CCCCCCEEEEECCCCCEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCC
LTDPYIVENGAAIYGESLKKVNGEIILGKKYELLEEILNFISKEIDYKLIPLNNLNDQEA
CCCCEEEECCCEEHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHH
TQLTGLKGNSLNLMRDRHWSMPFLNPPSFLEEKINNCCKKYKVDIFKGNRMSHLLSTNSN
HHHCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCHHHHHHCCCC
KGKAINALKKYSNIQNIKIIGLGDSPNDLPLLLNSDIRIVIPGIDGPNLNLLDQLKDFEF
CCHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHCCCEE
TLASEPNGYGWKNEINKLINKLELI
EEECCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEDSSLWVVSDVDGTLMDHSYDLTPAKETIKILKNKSIPVILCTSKTASEVKVIRKELN
CCCCCCEEEEECCCCCEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCC
LTDPYIVENGAAIYGESLKKVNGEIILGKKYELLEEILNFISKEIDYKLIPLNNLNDQEA
CCCCEEEECCCEEHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHH
TQLTGLKGNSLNLMRDRHWSMPFLNPPSFLEEKINNCCKKYKVDIFKGNRMSHLLSTNSN
HHHCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCHHHHHHCCCC
KGKAINALKKYSNIQNIKIIGLGDSPNDLPLLLNSDIRIVIPGIDGPNLNLLDQLKDFEF
CCHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHCCCEE
TLASEPNGYGWKNEINKLINKLELI
EEECCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA