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The map label for this gene is ureD [H]

Identifier: 78779217

GI number: 78779217

Start: 770297

End: 771199

Strand: Direct

Name: ureD [H]

Synonym: PMT9312_0833

Alternate gene names: 78779217

Gene position: 770297-771199 (Clockwise)

Preceding gene: 78779208

Following gene: 78779218

Centisome position: 45.07

GC content: 28.9

Gene sequence:

>903_bases
ATGATTAAAACTTCATGGGAAGGTAATTGTTTCTTAAATTTTTTTAATAATAAAGCAAGTATAGGAAATGTTGATAAAAC
AATCTTTAAATCTAAATCAACTTCTCCTTATAAGTTATTAAAGTCTACTCATGATGAAGAGGGCAGATGTATTTTGCCCG
TTTTACATACTGCAGGGGGATTGGTAGGAGGAGATTTACTTCAGTTTGAAGTAAATCTTGAAAAAAACTCTAAGGTTTTG
TTGACAACTTCTTCAGCTCAGAAAGTATATGGATCAGTTGGAAGATCTAAAATTAATCCAAAAGGAAGTTTTTCAAAACA
AAAAAATTATATAAAAATTCTTGATAATTCTCATTTAGAATATTTGCCCCAAGAAACTATTATCTTTGCAAATGGTTTAT
ACGATCAAAAGTTTAAAGTATTTATTTCGGAAAATTCAAGTTTTTTATTTACGGATTTAATAAGACTTGGAAGATCTTCT
TCTGGTGAGTCTATAGAGAGTGGGGTTTTTAGATCCAAATTAGAAATCATCCGAAATAATGATTTATATGATGATTGGGA
ATATGTTGATCAAATTGAATTATCCAAAGCAAGTTATGAGGCAAAGTCAGGCATGGACTACATGCCCGTTTTTGGATCCT
TAATTTGGGTTTGTGAAAAAGATTTTTCAAAATTAAAAATAAATAATTTAGTGGGAAATATAAAAAAATTTTTCAAAGAA
AGTGATAATCATTTATCAATTGGAATTCTTGAAAATGGAATCTCTGTAAGATTCTTAGGAAGTTCTTCTCAAGAAGCCAG
GAAATGTTTTTTTTGTATTTGGAAACAAATTAGGTCTGTTTGTGGATTTTGTGAGCCAAAATATCAAGGTGTATGGCCTT
TACAAGATTCTATGAATTATTAA

Upstream 100 bases:

>100_bases
TCGGTTTTTCCTTAATCCAATCAGTTACAACAATTTGTTTATTCATTCTCATAATCAAAATTTTTGGTTACTTTAATTTA
GTAATTAAAGAAAACAATTT

Downstream 100 bases:

>100_bases
TTATGTTCAGAGAGAACCTTTTTTAAGAATTTATAGATTAATTTTTTATTATGCATCTTTCACCTCAAGAAAAGGATAAA
TTATTGATTTTTTCTGCTGC

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MIKTSWEGNCFLNFFNNKASIGNVDKTIFKSKSTSPYKLLKSTHDEEGRCILPVLHTAGGLVGGDLLQFEVNLEKNSKVL
LTTSSAQKVYGSVGRSKINPKGSFSKQKNYIKILDNSHLEYLPQETIIFANGLYDQKFKVFISENSSFLFTDLIRLGRSS
SGESIESGVFRSKLEIIRNNDLYDDWEYVDQIELSKASYEAKSGMDYMPVFGSLIWVCEKDFSKLKINNLVGNIKKFFKE
SDNHLSIGILENGISVRFLGSSSQEARKCFFCIWKQIRSVCGFCEPKYQGVWPLQDSMNY

Sequences:

>Translated_300_residues
MIKTSWEGNCFLNFFNNKASIGNVDKTIFKSKSTSPYKLLKSTHDEEGRCILPVLHTAGGLVGGDLLQFEVNLEKNSKVL
LTTSSAQKVYGSVGRSKINPKGSFSKQKNYIKILDNSHLEYLPQETIIFANGLYDQKFKVFISENSSFLFTDLIRLGRSS
SGESIESGVFRSKLEIIRNNDLYDDWEYVDQIELSKASYEAKSGMDYMPVFGSLIWVCEKDFSKLKINNLVGNIKKFFKE
SDNHLSIGILENGISVRFLGSSSQEARKCFFCIWKQIRSVCGFCEPKYQGVWPLQDSMNY
>Mature_300_residues
MIKTSWEGNCFLNFFNNKASIGNVDKTIFKSKSTSPYKLLKSTHDEEGRCILPVLHTAGGLVGGDLLQFEVNLEKNSKVL
LTTSSAQKVYGSVGRSKINPKGSFSKQKNYIKILDNSHLEYLPQETIIFANGLYDQKFKVFISENSSFLFTDLIRLGRSS
SGESIESGVFRSKLEIIRNNDLYDDWEYVDQIELSKASYEAKSGMDYMPVFGSLIWVCEKDFSKLKINNLVGNIKKFFKE
SDNHLSIGILENGISVRFLGSSSQEARKCFFCIWKQIRSVCGFCEPKYQGVWPLQDSMNY

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 34068; Mature: 34068

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTSWEGNCFLNFFNNKASIGNVDKTIFKSKSTSPYKLLKSTHDEEGRCILPVLHTAGG
CCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEHHHCCC
LVGGDLLQFEVNLEKNSKVLLTTSSAQKVYGSVGRSKINPKGSFSKQKNYIKILDNSHLE
CCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHH
YLPQETIIFANGLYDQKFKVFISENSSFLFTDLIRLGRSSSGESIESGVFRSKLEIIRNN
HCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
DLYDDWEYVDQIELSKASYEAKSGMDYMPVFGSLIWVCEKDFSKLKINNLVGNIKKFFKE
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC
SDNHLSIGILENGISVRFLGSSSQEARKCFFCIWKQIRSVCGFCEPKYQGVWPLQDSMNY
CCCEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MIKTSWEGNCFLNFFNNKASIGNVDKTIFKSKSTSPYKLLKSTHDEEGRCILPVLHTAGG
CCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEHHHCCC
LVGGDLLQFEVNLEKNSKVLLTTSSAQKVYGSVGRSKINPKGSFSKQKNYIKILDNSHLE
CCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHH
YLPQETIIFANGLYDQKFKVFISENSSFLFTDLIRLGRSSSGESIESGVFRSKLEIIRNN
HCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
DLYDDWEYVDQIELSKASYEAKSGMDYMPVFGSLIWVCEKDFSKLKINNLVGNIKKFFKE
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC
SDNHLSIGILENGISVRFLGSSSQEARKCFFCIWKQIRSVCGFCEPKYQGVWPLQDSMNY
CCCEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA