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The map label for this gene is amiC [H]

Identifier: 78779213

GI number: 78779213

Start: 767099

End: 768376

Strand: Reverse

Name: amiC [H]

Synonym: PMT9312_0829

Alternate gene names: 78779213

Gene position: 768376-767099 (Counterclockwise)

Preceding gene: 78779214

Following gene: 78779212

Centisome position: 44.96

GC content: 40.92

Gene sequence:

>1278_bases
ATGAGAATTTCAAGGCGTATTTTGGCAGGATTAGCTACTGCCTCACTTGCTGTCACAGCAACTTCATGCGGTGGAGGTGG
AACCTCCGGAAGTTTCGATGACACAGTAACCGTTGGTATTTTACATTCCTTATCCGGAACAATGGCAATTTCTGAATCAA
CTCTTGTTGATACAGAAAAAATGGCTATTGAGGAGATAAATGCTGCTGGTGGAGTAACAGTTGGCGGCAAAAGCTACAAA
ATAGAGTACATAGTTGAAGATGGTGCATCTGACTGGCCTACTTTTGCTGAAAAATCTAAGAAACTTATAGACCAAGACGG
AGTTCCTGTCGTATTTGGTGGTTGGACATCTGCAAGTAGAAAGGCAATGTTACCAGTCTATGAATCAAAGGATGCCTTCC
TCTATTATCCGATTCAGTACGAAGCACAAGAATGCTCTAACAACATTTTCTATACAGGAGCCACACCAAACCAACAGTCA
GAACCTGCTACAGATTTCATGTATAAGCGTTCTCCAGCCGCCGGTGGAGATTTCTTCCTTGTAGGTTCAGATTATGTTTT
CCCAAGAACATCAAACACAATTACAAAAGCTCAGGTAAAACAGTTAGGAGGTAAAGTTGTTGGAGAAGATTACCTTCCAT
TAGGTAATACTGAAGTTGCTCCAATTATCTCAAAAATTAAAAAAGCTTTGCCTGAAGGTGGAATAATCATCAACACACTG
AATGGTGACCAAAACGTTGCATTCTTCAAACAGATCCAAGACGCAGGTATCACACCTTCAAGTGGCTACTACGTAATGAA
CTATTCGATTGCTGAAGAAGAGATTAGTACAATTGGTCCAGAGTTCCTTGAAGGTCACTACGGTGCCTGGAACTACATGA
TGTCAATTGATACTCCTGCATCAAAGAAATTTGCTAAAAGTTTTAAGAAAAGATGGGGAGCAGATCGTGTTGTAGCTGAT
CCTCAAGAATCTGCATATAACATGGTTTATCTATGGAAGCAGGCAGTGGAAGATGCTGGTACATTCGACGATAATGCTGT
TAGGGAAGCCTTAGTTGGACAAAAATTTGATGCTCCACAAGGACCAGTCGAGGTTATGCCTAATCACCACTTATCTCAAA
CCGTAAGAATTGGTAAGATTAACGCAGAGGGAGGATTTACAATTCTTGAAGAGACAGGAGTTGTTCTTCCTCAAGCATGG
AACCAAAAGCATCCAAGTTCCAAAGGATTTGCATGTGATTGGACAGATCCTTCAAAGGGAGAAAAGTATAAGCTTTAA

Upstream 100 bases:

>100_bases
TCAACAAAAAGTTACGGCTGATACAAAACGAATTCCCACTCATTAATAACTTTTACTTTATCCCCCTAATGAGGGTCAAT
TACCTAATTTATCCGAATTC

Downstream 100 bases:

>100_bases
TCTAATTTAAACCTATACTTCAAAATAAAAGGAGGTTAACACCTCCTTTTATTTTATATAAACAATTTTTCATTTTTAAA
TTGGAGTTACTTCTAGATAG

Product: putative urea ABC transporter, substrate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MRISRRILAGLATASLAVTATSCGGGGTSGSFDDTVTVGILHSLSGTMAISESTLVDTEKMAIEEINAAGGVTVGGKSYK
IEYIVEDGASDWPTFAEKSKKLIDQDGVPVVFGGWTSASRKAMLPVYESKDAFLYYPIQYEAQECSNNIFYTGATPNQQS
EPATDFMYKRSPAAGGDFFLVGSDYVFPRTSNTITKAQVKQLGGKVVGEDYLPLGNTEVAPIISKIKKALPEGGIIINTL
NGDQNVAFFKQIQDAGITPSSGYYVMNYSIAEEEISTIGPEFLEGHYGAWNYMMSIDTPASKKFAKSFKKRWGADRVVAD
PQESAYNMVYLWKQAVEDAGTFDDNAVREALVGQKFDAPQGPVEVMPNHHLSQTVRIGKINAEGGFTILEETGVVLPQAW
NQKHPSSKGFACDWTDPSKGEKYKL

Sequences:

>Translated_425_residues
MRISRRILAGLATASLAVTATSCGGGGTSGSFDDTVTVGILHSLSGTMAISESTLVDTEKMAIEEINAAGGVTVGGKSYK
IEYIVEDGASDWPTFAEKSKKLIDQDGVPVVFGGWTSASRKAMLPVYESKDAFLYYPIQYEAQECSNNIFYTGATPNQQS
EPATDFMYKRSPAAGGDFFLVGSDYVFPRTSNTITKAQVKQLGGKVVGEDYLPLGNTEVAPIISKIKKALPEGGIIINTL
NGDQNVAFFKQIQDAGITPSSGYYVMNYSIAEEEISTIGPEFLEGHYGAWNYMMSIDTPASKKFAKSFKKRWGADRVVAD
PQESAYNMVYLWKQAVEDAGTFDDNAVREALVGQKFDAPQGPVEVMPNHHLSQTVRIGKINAEGGFTILEETGVVLPQAW
NQKHPSSKGFACDWTDPSKGEKYKL
>Mature_425_residues
MRISRRILAGLATASLAVTATSCGGGGTSGSFDDTVTVGILHSLSGTMAISESTLVDTEKMAIEEINAAGGVTVGGKSYK
IEYIVEDGASDWPTFAEKSKKLIDQDGVPVVFGGWTSASRKAMLPVYESKDAFLYYPIQYEAQECSNNIFYTGATPNQQS
EPATDFMYKRSPAAGGDFFLVGSDYVFPRTSNTITKAQVKQLGGKVVGEDYLPLGNTEVAPIISKIKKALPEGGIIINTL
NGDQNVAFFKQIQDAGITPSSGYYVMNYSIAEEEISTIGPEFLEGHYGAWNYMMSIDTPASKKFAKSFKKRWGADRVVAD
PQESAYNMVYLWKQAVEDAGTFDDNAVREALVGQKFDAPQGPVEVMPNHHLSQTVRIGKINAEGGFTILEETGVVLPQAW
NQKHPSSKGFACDWTDPSKGEKYKL

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46062; Mature: 46062

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISRRILAGLATASLAVTATSCGGGGTSGSFDDTVTVGILHSLSGTMAISESTLVDTEK
CCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEHHHHCCCCEEECCCHHCCHHH
MAIEEINAAGGVTVGGKSYKIEYIVEDGASDWPTFAEKSKKLIDQDGVPVVFGGWTSASR
HHHHHHHCCCCEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCC
KAMLPVYESKDAFLYYPIQYEAQECSNNIFYTGATPNQQSEPATDFMYKRSPAAGGDFFL
CEECEEEECCCCEEEEEEEEEHHHHCCCEEEECCCCCCCCCCCHHHHEECCCCCCCCEEE
VGSDYVFPRTSNTITKAQVKQLGGKVVGEDYLPLGNTEVAPIISKIKKALPEGGIIINTL
ECCCEECCCCCCCHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC
NGDQNVAFFKQIQDAGITPSSGYYVMNYSIAEEEISTIGPEFLEGHYGAWNYMMSIDTPA
CCCCCHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHCCHHHHCCCCCEEEEEEEECCCC
SKKFAKSFKKRWGADRVVADPQESAYNMVYLWKQAVEDAGTFDDNAVREALVGQKFDAPQ
HHHHHHHHHHHCCCCCEEECCHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC
GPVEVMPNHHLSQTVRIGKINAEGGFTILEETGVVLPQAWNQKHPSSKGFACDWTDPSKG
CCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCEECCCCCCCCCCCCCCEEEECCCCCCC
EKYKL
CCCCC
>Mature Secondary Structure
MRISRRILAGLATASLAVTATSCGGGGTSGSFDDTVTVGILHSLSGTMAISESTLVDTEK
CCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEHHHHCCCCEEECCCHHCCHHH
MAIEEINAAGGVTVGGKSYKIEYIVEDGASDWPTFAEKSKKLIDQDGVPVVFGGWTSASR
HHHHHHHCCCCEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCC
KAMLPVYESKDAFLYYPIQYEAQECSNNIFYTGATPNQQSEPATDFMYKRSPAAGGDFFL
CEECEEEECCCCEEEEEEEEEHHHHCCCEEEECCCCCCCCCCCHHHHEECCCCCCCCEEE
VGSDYVFPRTSNTITKAQVKQLGGKVVGEDYLPLGNTEVAPIISKIKKALPEGGIIINTL
ECCCEECCCCCCCHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC
NGDQNVAFFKQIQDAGITPSSGYYVMNYSIAEEEISTIGPEFLEGHYGAWNYMMSIDTPA
CCCCCHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHCCHHHHCCCCCEEEEEEEECCCC
SKKFAKSFKKRWGADRVVADPQESAYNMVYLWKQAVEDAGTFDDNAVREALVGQKFDAPQ
HHHHHHHHHHHCCCCCEEECCHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC
GPVEVMPNHHLSQTVRIGKINAEGGFTILEETGVVLPQAWNQKHPSSKGFACDWTDPSKG
CCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCEECCCCCCCCCCCCCCEEEECCCCCCC
EKYKL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]