Click here to switch to the map view.

The map label for this gene is 78779191

Identifier: 78779191

GI number: 78779191

Start: 751513

End: 752124

Strand: Direct

Name: 78779191

Synonym: PMT9312_0807

Alternate gene names: NA

Gene position: 751513-752124 (Clockwise)

Preceding gene: 78779189

Following gene: 78779195

Centisome position: 43.97

GC content: 29.9

Gene sequence:

>612_bases
ATGCAGCCTCATAGCCTAAAGCTATCTCCAGAATCTGATTTGATAAATTCAATTAAAGAATATTCTCTTTCAAAAAATTT
ATATGGTTATATTTCGGGCGTGGTTGGTAATCTTAGAACAGTTTGTATTCAATGCCCAGGAAATCAAGAGATAAATAAAT
TTGAAGGGAATCTTGAGATAGTATCTTTAAATGGTCATTTTAATAAAGGTGATGTTCATCTTCATTTGAGCTTCGCAGAT
GAGGGATGTAATGTCTTTGGAGGTCATCTTGAGGAGGGATGCATTGTAAAAAAAGGGACGGACATATTATTACTTTCTTT
TGAACAAAAAATTATCAATGTCTCAAATAATGATTTGATTACAAATCAATCACGTGTGAAAGCCTATATTTTAAACGAAT
GTCCTTGGTCTAAAAGAGCAATTAGGTTACTTAATTTTTACAATATTCCTCATGAAGTTGTTTTGATCGACAATGATGAA
AGCTTTCAAAAAATAATGGTTAAAAGTAACCATAATACTTTCCCTCAAATATTTTTGGATAATAAATTTTTTGGTGGATA
TGATGAAATATCAGAACAAGCAAAATTAGATAAACTAACTTCATTTAAGTAA

Upstream 100 bases:

>100_bases
CTTGTAAAGCTAAATTTAAATCAGAATCCTAAAGATTATCAACACTACTTCTCTTTATTATTCATAATGTTTTATATTAC
AAAATTATTCATAATATCTA

Downstream 100 bases:

>100_bases
TATAAATTTTTAACTATCACGATTTGTAAGCTTTTCAGAAATCAATTCTTCCTCTAACTGCTTTATTAATCTTGAAACAA
GATTTTGAAATTCTGGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MQPHSLKLSPESDLINSIKEYSLSKNLYGYISGVVGNLRTVCIQCPGNQEINKFEGNLEIVSLNGHFNKGDVHLHLSFAD
EGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINVSNNDLITNQSRVKAYILNECPWSKRAIRLLNFYNIPHEVVLIDNDE
SFQKIMVKSNHNTFPQIFLDNKFFGGYDEISEQAKLDKLTSFK

Sequences:

>Translated_203_residues
MQPHSLKLSPESDLINSIKEYSLSKNLYGYISGVVGNLRTVCIQCPGNQEINKFEGNLEIVSLNGHFNKGDVHLHLSFAD
EGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINVSNNDLITNQSRVKAYILNECPWSKRAIRLLNFYNIPHEVVLIDNDE
SFQKIMVKSNHNTFPQIFLDNKFFGGYDEISEQAKLDKLTSFK
>Mature_203_residues
MQPHSLKLSPESDLINSIKEYSLSKNLYGYISGVVGNLRTVCIQCPGNQEINKFEGNLEIVSLNGHFNKGDVHLHLSFAD
EGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINVSNNDLITNQSRVKAYILNECPWSKRAIRLLNFYNIPHEVVLIDNDE
SFQKIMVKSNHNTFPQIFLDNKFFGGYDEISEQAKLDKLTSFK

Specific function: Unknown

COG id: COG1661

COG function: function code R; Predicted DNA-binding protein with PD1-like DNA-binding motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22996; Mature: 22996

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPHSLKLSPESDLINSIKEYSLSKNLYGYISGVVGNLRTVCIQCPGNQEINKFEGNLEI
CCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCEEECCCEEE
VSLNGHFNKGDVHLHLSFADEGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINVSNNDLI
EEECCCCCCCEEEEEEEECCCCCCEECCCCCCCEEEECCCCEEEEEECCEEEECCCCCEE
TNQSRVKAYILNECPWSKRAIRLLNFYNIPHEVVLIDNDESFQKIMVKSNHNTFPQIFLD
ECCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEC
NKFFGGYDEISEQAKLDKLTSFK
CCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQPHSLKLSPESDLINSIKEYSLSKNLYGYISGVVGNLRTVCIQCPGNQEINKFEGNLEI
CCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCEEECCCEEE
VSLNGHFNKGDVHLHLSFADEGCNVFGGHLEEGCIVKKGTDILLLSFEQKIINVSNNDLI
EEECCCCCCCEEEEEEEECCCCCCEECCCCCCCEEEECCCCEEEEEECCEEEECCCCCEE
TNQSRVKAYILNECPWSKRAIRLLNFYNIPHEVVLIDNDESFQKIMVKSNHNTFPQIFLD
ECCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEC
NKFFGGYDEISEQAKLDKLTSFK
CCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA