| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779184
Identifier: 78779184
GI number: 78779184
Start: 744535
End: 745590
Strand: Reverse
Name: 78779184
Synonym: PMT9312_0800
Alternate gene names: NA
Gene position: 745590-744535 (Counterclockwise)
Preceding gene: 78779185
Following gene: 78779183
Centisome position: 43.62
GC content: 25.09
Gene sequence:
>1056_bases ATGAAAAAAGATACCTCTAATTCTTTTAAGCCTGAAAAAGGAATGGAAGTAACTTATGAAGAACTCCATATCCGTCACAT TACCCTTTTAATAGATATCAAAAATAAAGAATTGAATAATTGGTTTTTAAAGATGGCAATTATTAATACCTTTGATGACT TAAAAATATTTCTAAATAATCTCAAGAAAAATAAGAATAAATGCATAATTGCTATTTGCGGTAACGAAATCATTGGTTAT ATGAATATTTTTCCTTTAAACAAAAAAGAGACTTGCTTAAAAATATCTAAGCCCAAGTTAATTAACAACAATTGTTCCTT TACAGAGAAACAATTAACTTTAGGATTGATAAAAAAATCAATCTCCATAACGGATATCAAGACTTCAAGTTGGATAATTA ACTCCGAGATAAATAATATTGACCTAATATCAACCTCAAGAGAATTAGGCTTTCAACCTTTAGGAGAGATAATACTATGG GATGGTTGTGATCTAAATGAGTCAATCAAACAAAATACCCAAGATTATGAATTAATTAATGAATTCCATAACATTAATAA AAAAAATATATTGAGTATAGTAAATTTTATAAGATCAAATCAATCACCTTTAATAAGAAATATTTTAGATTTTGATCAAG ACGATATTCTTAAAAGAAATAACTCTAAAAGTGGTGCCTTAGTATATGAAAATTCTGTTTTATGTACAATCTTAAAAGAT ATAAATTATCAAAACGATGAAATTTATACTTTAACTATAAGTAGATATTGGGATAATAGATTAAATTCTATTTTAAAAGA ATTTATAAAAAGATTCTTTGTAAAATCTCCTATGTCTTATCTAAAAAGCTACAAAGAGAATTCTCAACTAAATACCTTTC TCGAAGAATGTAACTTAAAAGAAAAAAATCAAGAGATTATTCTTATAAGGAATACAATAGTTAAGAATGAAGCAAAACAA GTAAATAAAATAAATCAATCTTTGGAATCAATCTTTGACAAATTAAGTCCACAAAATAATCCATATCCATCTCCTTTGCC ATTAAAGTCAAAGTGA
Upstream 100 bases:
>100_bases ATAAAGCCGTAGATAAAATACTCAAAAGAATCTTAATATCTAATCCAGCTGGCAATGGTGATGAGAAAACTCCTATAGTG TTAATAAGAAAAAAAATTAA
Downstream 100 bases:
>100_bases AATTTTATAAACCTAAACCCAGGTCAATTTTAAGCTTCGATGTAGGAATCAAAAGAATAGGATTGGCTTATTGTGATCCA CTATGCATAACATCAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKKDTSNSFKPEKGMEVTYEELHIRHITLLIDIKNKELNNWFLKMAIINTFDDLKIFLNNLKKNKNKCIIAICGNEIIGY MNIFPLNKKETCLKISKPKLINNNCSFTEKQLTLGLIKKSISITDIKTSSWIINSEINNIDLISTSRELGFQPLGEIILW DGCDLNESIKQNTQDYELINEFHNINKKNILSIVNFIRSNQSPLIRNILDFDQDDILKRNNSKSGALVYENSVLCTILKD INYQNDEIYTLTISRYWDNRLNSILKEFIKRFFVKSPMSYLKSYKENSQLNTFLEECNLKEKNQEIILIRNTIVKNEAKQ VNKINQSLESIFDKLSPQNNPYPSPLPLKSK
Sequences:
>Translated_351_residues MKKDTSNSFKPEKGMEVTYEELHIRHITLLIDIKNKELNNWFLKMAIINTFDDLKIFLNNLKKNKNKCIIAICGNEIIGY MNIFPLNKKETCLKISKPKLINNNCSFTEKQLTLGLIKKSISITDIKTSSWIINSEINNIDLISTSRELGFQPLGEIILW DGCDLNESIKQNTQDYELINEFHNINKKNILSIVNFIRSNQSPLIRNILDFDQDDILKRNNSKSGALVYENSVLCTILKD INYQNDEIYTLTISRYWDNRLNSILKEFIKRFFVKSPMSYLKSYKENSQLNTFLEECNLKEKNQEIILIRNTIVKNEAKQ VNKINQSLESIFDKLSPQNNPYPSPLPLKSK >Mature_351_residues MKKDTSNSFKPEKGMEVTYEELHIRHITLLIDIKNKELNNWFLKMAIINTFDDLKIFLNNLKKNKNKCIIAICGNEIIGY MNIFPLNKKETCLKISKPKLINNNCSFTEKQLTLGLIKKSISITDIKTSSWIINSEINNIDLISTSRELGFQPLGEIILW DGCDLNESIKQNTQDYELINEFHNINKKNILSIVNFIRSNQSPLIRNILDFDQDDILKRNNSKSGALVYENSVLCTILKD INYQNDEIYTLTISRYWDNRLNSILKEFIKRFFVKSPMSYLKSYKENSQLNTFLEECNLKEKNQEIILIRNTIVKNEAKQ VNKINQSLESIFDKLSPQNNPYPSPLPLKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40916; Mature: 40916
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDTSNSFKPEKGMEVTYEELHIRHITLLIDIKNKELNNWFLKMAIINTFDDLKIFLNN CCCCCCCCCCCCCCCEEEHHHEEEEEEEEEEEECCCCCCHHEEEHHHHHHHHHHHHHHHH LKKNKNKCIIAICGNEIIGYMNIFPLNKKETCLKISKPKLINNNCSFTEKQLTLGLIKKS HCCCCCCEEEEEECCCEEECEEEEECCCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHC ISITDIKTSSWIINSEINNIDLISTSRELGFQPLGEIILWDGCDLNESIKQNTQDYELIN CEEEEEECCCEEEECCCCCEEEEECCHHCCCCCCCCEEEECCCCCCHHHHCCCHHHHHHH EFHNINKKNILSIVNFIRSNQSPLIRNILDFDQDDILKRNNSKSGALVYENSVLCTILKD HHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCCCCCEEEEECCHHEEHHHH INYQNDEIYTLTISRYWDNRLNSILKEFIKRFFVKSPMSYLKSYKENSQLNTFLEECNLK CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHCCCC EKNQEIILIRNTIVKNEAKQVNKINQSLESIFDKLSPQNNPYPSPLPLKSK CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKDTSNSFKPEKGMEVTYEELHIRHITLLIDIKNKELNNWFLKMAIINTFDDLKIFLNN CCCCCCCCCCCCCCCEEEHHHEEEEEEEEEEEECCCCCCHHEEEHHHHHHHHHHHHHHHH LKKNKNKCIIAICGNEIIGYMNIFPLNKKETCLKISKPKLINNNCSFTEKQLTLGLIKKS HCCCCCCEEEEEECCCEEECEEEEECCCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHC ISITDIKTSSWIINSEINNIDLISTSRELGFQPLGEIILWDGCDLNESIKQNTQDYELIN CEEEEEECCCEEEECCCCCEEEEECCHHCCCCCCCCEEEECCCCCCHHHHCCCHHHHHHH EFHNINKKNILSIVNFIRSNQSPLIRNILDFDQDDILKRNNSKSGALVYENSVLCTILKD HHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCCCCCEEEEECCHHEEHHHH INYQNDEIYTLTISRYWDNRLNSILKEFIKRFFVKSPMSYLKSYKENSQLNTFLEECNLK CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHCCCC EKNQEIILIRNTIVKNEAKQVNKINQSLESIFDKLSPQNNPYPSPLPLKSK CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA