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The map label for this gene is accD [H]

Identifier: 78779176

GI number: 78779176

Start: 737761

End: 738642

Strand: Reverse

Name: accD [H]

Synonym: PMT9312_0792

Alternate gene names: 78779176

Gene position: 738642-737761 (Counterclockwise)

Preceding gene: 78779177

Following gene: 78779175

Centisome position: 43.22

GC content: 35.15

Gene sequence:

>882_bases
GTGTCATTAATCGACTGGTTTGCCGCAAGGCGTAAAGATCAATTTGTTGGGAAAGTTTCCCAAGATACTGACGAGGGAGA
CGGTTTGTGGGTTAAATGTTCAGAATGTTCTCAAGTAGCCTATAGAAAAGACCTAATTTCAAATTTCAATGTTTGTAGTA
ATTGTGGTCACCATAATAGGATTAATAGTGATGAAAGGATAAATATAATTGCTGATAAAAATTCATTCAAAGAGTTTGAT
AGTTCACTAAGTCCTACAGATCCTTTAGGTTTTAAAGATAGAAGGTCTTATGCTGATCGAATTAAAGAAAGTCAAGCAGG
TACTGGCTTAAGAGATGGTGTCATAACAGGTTTTTGTTCTGTAAATTCAATGCCTTTAGCATTAGCTGTAATGGATTTTA
GATTTATGGGCGGATCCATGGGCTCAGTAGTTGGTGAAAAAATTACGAGGATAATTGAAAGAGCAACTATAGAAAATTAC
CCAATTCTTATTGTTTGCGCATCAGGTGGAGCAAGGATGCAAGAAGGTATGTTAAGTCTCATGCAAATGGCAAAAATATC
GGGAGCACTCAAAAAACATAAAGAAAAAAATCTTCTGTATATGCCATTGTTAACTCATCCAACTACTGGAGGAGTAACAG
CCAGCTTTGCGATGTTAGGTGATTTAATATTGGCGGAACCTAAAGCTCTTATTGGATTTGCGGGAAGAAGAGTTATTGAA
CAAACATTAAGAGAAAAATTACCTGATAATTTTCAAACAGCTGAATATCTTCTTGAGCATGGTTTTGTTGATGTAATAGT
GAAAAGGAAAGATCTCAAGACTACTTTGACTAAAATTTTAAAAATCCACGGTGTAAAAGAACTGGCAGAAGCAAATATAT
AA

Upstream 100 bases:

>100_bases
AGGATAAGGGAGTTCCTAATCTATAAAATCTCAAATATTTATATATCTTTCTTGATAAAAGTACCTTACTTAGATTTAAA
TAGAAAAAACAGGTAACGTT

Downstream 100 bases:

>100_bases
TAATGAGAATAATTTCTAATTTATTTTATTTTTCTTTAAGCCTTTTTTTGTTTATTTTAAATTTTGCTACCTATTCATAT
GCAATAGGAAATGTTGATTG

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSLIDWFAARRKDQFVGKVSQDTDEGDGLWVKCSECSQVAYRKDLISNFNVCSNCGHHNRINSDERINIIADKNSFKEFD
SSLSPTDPLGFKDRRSYADRIKESQAGTGLRDGVITGFCSVNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATIENY
PILIVCASGGARMQEGMLSLMQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIE
QTLREKLPDNFQTAEYLLEHGFVDVIVKRKDLKTTLTKILKIHGVKELAEANI

Sequences:

>Translated_293_residues
MSLIDWFAARRKDQFVGKVSQDTDEGDGLWVKCSECSQVAYRKDLISNFNVCSNCGHHNRINSDERINIIADKNSFKEFD
SSLSPTDPLGFKDRRSYADRIKESQAGTGLRDGVITGFCSVNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATIENY
PILIVCASGGARMQEGMLSLMQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIE
QTLREKLPDNFQTAEYLLEHGFVDVIVKRKDLKTTLTKILKIHGVKELAEANI
>Mature_292_residues
SLIDWFAARRKDQFVGKVSQDTDEGDGLWVKCSECSQVAYRKDLISNFNVCSNCGHHNRINSDERINIIADKNSFKEFDS
SLSPTDPLGFKDRRSYADRIKESQAGTGLRDGVITGFCSVNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATIENYP
ILIVCASGGARMQEGMLSLMQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIEQ
TLREKLPDNFQTAEYLLEHGFVDVIVKRKDLKTTLTKILKIHGVKELAEANI

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=254, Percent_Identity=50.7874015748031, Blast_Score=275, Evalue=3e-75,
Organism=Caenorhabditis elegans, GI25147362, Length=196, Percent_Identity=26.0204081632653, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25147359, Length=196, Percent_Identity=26.0204081632653, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 32468; Mature: 32337

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIDWFAARRKDQFVGKVSQDTDEGDGLWVKCSECSQVAYRKDLISNFNVCSNCGHHNR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCC
INSDERINIIADKNSFKEFDSSLSPTDPLGFKDRRSYADRIKESQAGTGLRDGVITGFCS
CCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHEEECC
VNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATIENYPILIVCASGGARMQEGMLSL
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
MQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIE
HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QTLREKLPDNFQTAEYLLEHGFVDVIVKRKDLKTTLTKILKIHGVKELAEANI
HHHHHHCCCCHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHCHHHHHHCCC
>Mature Secondary Structure 
SLIDWFAARRKDQFVGKVSQDTDEGDGLWVKCSECSQVAYRKDLISNFNVCSNCGHHNR
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCCC
INSDERINIIADKNSFKEFDSSLSPTDPLGFKDRRSYADRIKESQAGTGLRDGVITGFCS
CCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHEEECC
VNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATIENYPILIVCASGGARMQEGMLSL
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
MQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIE
HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QTLREKLPDNFQTAEYLLEHGFVDVIVKRKDLKTTLTKILKIHGVKELAEANI
HHHHHHCCCCHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA