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The map label for this gene is ccsA [H]

Identifier: 78779157

GI number: 78779157

Start: 720665

End: 721594

Strand: Direct

Name: ccsA [H]

Synonym: PMT9312_0773

Alternate gene names: 78779157

Gene position: 720665-721594 (Clockwise)

Preceding gene: 78779156

Following gene: 78779159

Centisome position: 42.16

GC content: 33.01

Gene sequence:

>930_bases
ATGATACTAGATAACCTTTTTAAAAATTTAATATATGACCCAGTTTCAGCGTTAGGTATTTTAGTCTTTTATATTTTATT
AGTTAATTTACCAATATCTTTAGGTGCAGTTTTCAAAAAGAAGTCTTTTTTTATTGTAAAACTACTTACGATTTTAGTGA
ATTTATTAATAACATTACAATTACTTTTTAGGTGGTCAATTTCTGGACATTTCCCAGTTAGCAACTTGTATGAATCTCTT
TATTTCCTTGCTTGGGGAATCTCAATGGGGCAACTATATATTGAGAGGGAATACTCATCTCCAATAATTCCGTCAATAGC
AATACCCATTGAGTTGCTGACCGTGGCCTTTGCTTGTTTTGTATTGCCTGACGATTTGAAATTATCATCTAACTTGGTCC
CAGCTTTAAGATCTAGTTGGCTAGTAATGCATGTTAGTGTCGTAATGCTTAGTTATGCGGCACTAATAATAGGGTCTCTA
CTGTCAGCTTCTGTTTTGTTTATTAATAGGAATAAACCGCTTCAAATTAGAAGTAGTTCTACAGGTATAGGAGGGTTCAA
ATTTTTTAATAACAATTATTTAAATGATTTAGCTGACCCTGTTGAATTTTCTCATTCAGAAGAATTAGATACATTAAGTT
ATCGTTCTATATTAATAGGTTTTGTACTTTTAACTCTCGGTTTAATTTCAGGCGCGGTTTGGGCTAATGAGGCATGGGGA
ACATGGTGGAGTTGGGATCCAAAGGAAACATGGGCATTTATCACATGGTTATTTTATGCAGCATATTTGCATATGAGAAT
AAGTAAGGGTTGGCAAGGAAGAAGACCAGCTTTATTAGCAACTTCAGGTTTCTTAGTTGTTATAGTATGTTATTTAGGTG
TTAATTTTTTAGGAATAGGTTTACATAGTTATGGATGGATATTTGGATGA

Upstream 100 bases:

>100_bases
AAAAATTTAAAACTTTATTATTAAAAAGTTACTCATATAAGGATGATTTAAATTATTATTTGGGTGTCATTGATTATTAA
AACTGGATAAATTTCTAGAA

Downstream 100 bases:

>100_bases
TTAGCTAATCTCCCAGAATTATTTATTGAGGTTCTGAAACCACTTTGCCATTTTGTGCTTCTTTCGCAACTTTTCTCAAG
TCATCACATCCCTCTTTTAA

Product: putative heme transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MILDNLFKNLIYDPVSALGILVFYILLVNLPISLGAVFKKKSFFIVKLLTILVNLLITLQLLFRWSISGHFPVSNLYESL
YFLAWGISMGQLYIEREYSSPIIPSIAIPIELLTVAFACFVLPDDLKLSSNLVPALRSSWLVMHVSVVMLSYAALIIGSL
LSASVLFINRNKPLQIRSSSTGIGGFKFFNNNYLNDLADPVEFSHSEELDTLSYRSILIGFVLLTLGLISGAVWANEAWG
TWWSWDPKETWAFITWLFYAAYLHMRISKGWQGRRPALLATSGFLVVIVCYLGVNFLGIGLHSYGWIFG

Sequences:

>Translated_309_residues
MILDNLFKNLIYDPVSALGILVFYILLVNLPISLGAVFKKKSFFIVKLLTILVNLLITLQLLFRWSISGHFPVSNLYESL
YFLAWGISMGQLYIEREYSSPIIPSIAIPIELLTVAFACFVLPDDLKLSSNLVPALRSSWLVMHVSVVMLSYAALIIGSL
LSASVLFINRNKPLQIRSSSTGIGGFKFFNNNYLNDLADPVEFSHSEELDTLSYRSILIGFVLLTLGLISGAVWANEAWG
TWWSWDPKETWAFITWLFYAAYLHMRISKGWQGRRPALLATSGFLVVIVCYLGVNFLGIGLHSYGWIFG
>Mature_309_residues
MILDNLFKNLIYDPVSALGILVFYILLVNLPISLGAVFKKKSFFIVKLLTILVNLLITLQLLFRWSISGHFPVSNLYESL
YFLAWGISMGQLYIEREYSSPIIPSIAIPIELLTVAFACFVLPDDLKLSSNLVPALRSSWLVMHVSVVMLSYAALIIGSL
LSASVLFINRNKPLQIRSSSTGIGGFKFFNNNYLNDLADPVEFSHSEELDTLSYRSILIGFVLLTLGLISGAVWANEAWG
TWWSWDPKETWAFITWLFYAAYLHMRISKGWQGRRPALLATSGFLVVIVCYLGVNFLGIGLHSYGWIFG

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 34751; Mature: 34751

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDNLFKNLIYDPVSALGILVFYILLVNLPISLGAVFKKKSFFIVKLLTILVNLLITLQ
CCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLFRWSISGHFPVSNLYESLYFLAWGISMGQLYIEREYSSPIIPSIAIPIELLTVAFACF
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHH
VLPDDLKLSSNLVPALRSSWLVMHVSVVMLSYAALIIGSLLSASVLFINRNKPLQIRSSS
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECCC
TGIGGFKFFNNNYLNDLADPVEFSHSEELDTLSYRSILIGFVLLTLGLISGAVWANEAWG
CCCCCEEEECCCCHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TWWSWDPKETWAFITWLFYAAYLHMRISKGWQGRRPALLATSGFLVVIVCYLGVNFLGIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCC
LHSYGWIFG
HHHCCCCCC
>Mature Secondary Structure
MILDNLFKNLIYDPVSALGILVFYILLVNLPISLGAVFKKKSFFIVKLLTILVNLLITLQ
CCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLFRWSISGHFPVSNLYESLYFLAWGISMGQLYIEREYSSPIIPSIAIPIELLTVAFACF
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHH
VLPDDLKLSSNLVPALRSSWLVMHVSVVMLSYAALIIGSLLSASVLFINRNKPLQIRSSS
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECCC
TGIGGFKFFNNNYLNDLADPVEFSHSEELDTLSYRSILIGFVLLTLGLISGAVWANEAWG
CCCCCEEEECCCCHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TWWSWDPKETWAFITWLFYAAYLHMRISKGWQGRRPALLATSGFLVVIVCYLGVNFLGIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCC
LHSYGWIFG
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA