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The map label for this gene is ddpX [H]

Identifier: 78779149

GI number: 78779149

Start: 710559

End: 711242

Strand: Direct

Name: ddpX [H]

Synonym: PMT9312_0765

Alternate gene names: 78779149

Gene position: 710559-711242 (Clockwise)

Preceding gene: 78779148

Following gene: 78779151

Centisome position: 41.57

GC content: 29.53

Gene sequence:

>684_bases
TTGAAAATTTGGAATAAAATACCAATTAAAGATAATGGAGATAAATTAATAGCTATACCTAGCTACTTAAAATTTTTAGA
TCCACACCCTTACTTTAATTTAGGAGCACCTTACAAAGATAAAACATCTATTTGGAAATTAAGAGAGGAGGTTGTAAATA
GATTAGTAAAAGTAAATGATTATTTGATATCAAAGAATAGAGTTTATATTTTAATTTATGACAGTTGGCGACCTTTAGAA
GTCCAAGAATTCATGTTTAAAAGAGCATTTTTATTAGAGTGTAAAAATTCGGATATTGAGGCTTCCTTACAAAATATGAA
ATCTTATCCATCTATTTTAAAAAGAGTTGAAAAATTTTGGGCATATCCTTCTTATGACTCTAGGTTCCCTCCACCTCATT
CAACTGGTGGAGCATTGGATGTTTGTTTATCTGATGAAGACGGAAATCTTGTAGAAATGGGAAGCAAAGTTGATCAAATG
GATGAGACTTCAAAGCCTGATTTTTATGAAAACATAAAGAATGAAGATGCAATTATTTGGAATAGTAGAAGAAATTTATT
AAGGGAAATTATGACTAAATTTGGATTTGCTCAACATCCTAATGAATGGTGGCATTTTAGTTATGGTGATCAATTATGGG
CTTGGAAAAATAAAAAAGCAAATGCCCTTTATGGAAAAATATAA

Upstream 100 bases:

>100_bases
TGATAATTCTGATAATAAATTCATTCATGATTTCTTGAATTGAATACTATCATTGTAATTTCTTATATATATGCCAATAT
AAATCAATTGCAAATTTCAA

Downstream 100 bases:

>100_bases
ATTCTAATGAATTTCATTTATTAAATTCAAAATAGAACTTTCTTCTTGCTTATTTATAAAATCTCCGAAATCCAAATCCG
AACTACTTTTCCAATGATCA

Product: D-ala-D-ala dipeptidase

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKIWNKIPIKDNGDKLIAIPSYLKFLDPHPYFNLGAPYKDKTSIWKLREEVVNRLVKVNDYLISKNRVYILIYDSWRPLE
VQEFMFKRAFLLECKNSDIEASLQNMKSYPSILKRVEKFWAYPSYDSRFPPPHSTGGALDVCLSDEDGNLVEMGSKVDQM
DETSKPDFYENIKNEDAIIWNSRRNLLREIMTKFGFAQHPNEWWHFSYGDQLWAWKNKKANALYGKI

Sequences:

>Translated_227_residues
MKIWNKIPIKDNGDKLIAIPSYLKFLDPHPYFNLGAPYKDKTSIWKLREEVVNRLVKVNDYLISKNRVYILIYDSWRPLE
VQEFMFKRAFLLECKNSDIEASLQNMKSYPSILKRVEKFWAYPSYDSRFPPPHSTGGALDVCLSDEDGNLVEMGSKVDQM
DETSKPDFYENIKNEDAIIWNSRRNLLREIMTKFGFAQHPNEWWHFSYGDQLWAWKNKKANALYGKI
>Mature_227_residues
MKIWNKIPIKDNGDKLIAIPSYLKFLDPHPYFNLGAPYKDKTSIWKLREEVVNRLVKVNDYLISKNRVYILIYDSWRPLE
VQEFMFKRAFLLECKNSDIEASLQNMKSYPSILKRVEKFWAYPSYDSRFPPPHSTGGALDVCLSDEDGNLVEMGSKVDQM
DETSKPDFYENIKNEDAIIWNSRRNLLREIMTKFGFAQHPNEWWHFSYGDQLWAWKNKKANALYGKI

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 26859; Mature: 26859

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIWNKIPIKDNGDKLIAIPSYLKFLDPHPYFNLGAPYKDKTSIWKLREEVVNRLVKVND
CCCCCCCCCCCCCCEEEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YLISKNRVYILIYDSWRPLEVQEFMFKRAFLLECKNSDIEASLQNMKSYPSILKRVEKFW
EEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AYPSYDSRFPPPHSTGGALDVCLSDEDGNLVEMGSKVDQMDETSKPDFYENIKNEDAIIW
CCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCHHHHHCCCCCCHHHHHCCCCCEEEE
NSRRNLLREIMTKFGFAQHPNEWWHFSYGDQLWAWKNKKANALYGKI
CHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKIWNKIPIKDNGDKLIAIPSYLKFLDPHPYFNLGAPYKDKTSIWKLREEVVNRLVKVND
CCCCCCCCCCCCCCEEEECHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YLISKNRVYILIYDSWRPLEVQEFMFKRAFLLECKNSDIEASLQNMKSYPSILKRVEKFW
EEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AYPSYDSRFPPPHSTGGALDVCLSDEDGNLVEMGSKVDQMDETSKPDFYENIKNEDAIIW
CCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCHHHHHCCCCCCHHHHHCCCCCEEEE
NSRRNLLREIMTKFGFAQHPNEWWHFSYGDQLWAWKNKKANALYGKI
CHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9751644 [H]