| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is 78779141
Identifier: 78779141
GI number: 78779141
Start: 702361
End: 703533
Strand: Direct
Name: 78779141
Synonym: PMT9312_0757
Alternate gene names: NA
Gene position: 702361-703533 (Clockwise)
Preceding gene: 78779140
Following gene: 78779142
Centisome position: 41.09
GC content: 33.5
Gene sequence:
>1173_bases ATGAGTTTTTCTATTTTTAAATATAGAAAAATTCCATTAGCTTGGTTGTTATTAACTAGGCAACCATTAAGGTTGGTAGT TGCTATTGCAGGAATAAGTTTTGCAGGAATTTTGATGTTTATGCAATTAGGTTTCAGAGATGGCTTATTTGATACGAGCG TAACTATTCATAAACTTTTAGATGCTGATTTAGTTTTAATAAGTCCCAGATCAAAAAGTTCTATAAGTATGAGTGGCTTC CCAAAAAGAAGGTTGATTCAAACTCTTGCTGTAGAAGATGTTGAAAAAACTGCTCCTGTAAATCTAAATTATTTACTTTG GAGAAATCCTGAAAATCTAAAAACTAGATCGATACTCGCATTAGGTTTCAATCCCACTGATTCACTTCTTTTAGATGATG GATTCTCAAGGAAAGCTTATAAATTGAGAAATCCATCGAGAGTTCTTTTTGACAAACTTTCTAGACCTGAATTTGGACCA ATTGAAGAATGGTTTTTATCAGATCAAAAAGTTGAAACTGAAGTTGCAGGGAAAAGAGTAATTGTTGAAGGTCTTGTGGA GTTGGGACCATCTTTCGGTGCAGACGGTAATTTGATAACTAGCCGAGAAACATTTTTAAGACTTTTTCCTGCAAATCCTC CTGGAAGTATAGAAATTGGTTTAGTAAAGCTTAAAAAAGGTTCTGATCCTAAATTGATTTCAAAAATTCTAAACAACTCA CTACCTAATGATGTTAAAGTTCTGACAAAAAATGAATTTATAGAATTTGAGAAGAATTATTGGAAAAATAGTACTGCAAT AGGTTTTATATTTAGTTTGGGAGCTTTGATGGGTTTCGTTGTAGGATGCGTTGTTGTTTATCAAATCCTTTATAGTGACG TTACAGACCACCTCCCAGAGTACGCCACTTTATTGGCTATGGGGTATAGACTTAAGTCTCTCTTCTTTGTAGTAGCTAGA GAGGGTTTTTTGTTGGCATTGTTTGGTTATTTACCAGCTTATTTCTCTGGTAAAATCCTTTACTTAGTTATAAGGAACTC CACTAAACTGCCAATAATAATGGATGCAGATAAAACGATTTTAATTTTTGTATTAGTTTTAGTTATGTGTATGGGGTCTG CTGGTATTGCTATGCGTAAATTAGTTGATGCCGATCCTGCCGAAATTTTCTAA
Upstream 100 bases:
>100_bases ATTCGCGAATTATCGAGGTACTCGTCAAACTAGATCAAGATTCTATAGATATTGTGCAAAATTATGCAGGAATGAAAGTG ATTGCAAAATTTATTCCCTA
Downstream 100 bases:
>100_bases TATTAAATGTCTAAAGCTAATAAATTAAAAAAAAATATAGACAACTTAAAAACAGTTTCAATAAATAATTTGAGTCACTT TTATGGGAAAAATGAAAATA
Product: ABC transporter transmembrane protein
Products: NA
Alternate protein names: ABC-Transporter Membrane Spanning Component; ABC Transporter Permease; ABC Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Glycolipid ABC Exporter Family Permease Protein; Glycolipid ABC Exporter Inner Membrane Subunit; DevC-Like ABC Transporter Permease Protein; Membrane Permease Or ABC Transporter Component; DevC-Like ABC Transporter Permease Component; Exporter Subunit DevC- ABC Transporter Family Protein; ABC-Transporter DevC-Like-Protein; ABC Transporter Transmembrane Protein; Permease Protein DevC-Like Protein; ABC Efflux Pump Inner Membrane Subunit; DevC-Like ABC Transporter Permease; ABC Transporter Permease Component; ABC-Transporter DevC Family Protein; ABC Transporter Membrane Spanning Subunit DevC-Like
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSFSIFKYRKIPLAWLLLTRQPLRLVVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLLDADLVLISPRSKSSISMSGF PKRRLIQTLAVEDVEKTAPVNLNYLLWRNPENLKTRSILALGFNPTDSLLLDDGFSRKAYKLRNPSRVLFDKLSRPEFGP IEEWFLSDQKVETEVAGKRVIVEGLVELGPSFGADGNLITSRETFLRLFPANPPGSIEIGLVKLKKGSDPKLISKILNNS LPNDVKVLTKNEFIEFEKNYWKNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPEYATLLAMGYRLKSLFFVVAR EGFLLALFGYLPAYFSGKILYLVIRNSTKLPIIMDADKTILIFVLVLVMCMGSAGIAMRKLVDADPAEIF
Sequences:
>Translated_390_residues MSFSIFKYRKIPLAWLLLTRQPLRLVVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLLDADLVLISPRSKSSISMSGF PKRRLIQTLAVEDVEKTAPVNLNYLLWRNPENLKTRSILALGFNPTDSLLLDDGFSRKAYKLRNPSRVLFDKLSRPEFGP IEEWFLSDQKVETEVAGKRVIVEGLVELGPSFGADGNLITSRETFLRLFPANPPGSIEIGLVKLKKGSDPKLISKILNNS LPNDVKVLTKNEFIEFEKNYWKNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPEYATLLAMGYRLKSLFFVVAR EGFLLALFGYLPAYFSGKILYLVIRNSTKLPIIMDADKTILIFVLVLVMCMGSAGIAMRKLVDADPAEIF >Mature_389_residues SFSIFKYRKIPLAWLLLTRQPLRLVVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLLDADLVLISPRSKSSISMSGFP KRRLIQTLAVEDVEKTAPVNLNYLLWRNPENLKTRSILALGFNPTDSLLLDDGFSRKAYKLRNPSRVLFDKLSRPEFGPI EEWFLSDQKVETEVAGKRVIVEGLVELGPSFGADGNLITSRETFLRLFPANPPGSIEIGLVKLKKGSDPKLISKILNNSL PNDVKVLTKNEFIEFEKNYWKNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPEYATLLAMGYRLKSLFFVVARE GFLLALFGYLPAYFSGKILYLVIRNSTKLPIIMDADKTILIFVLVLVMCMGSAGIAMRKLVDADPAEIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43638; Mature: 43507
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSIFKYRKIPLAWLLLTRQPLRLVVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLL CCCCCEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH DADLVLISPRSKSSISMSGFPKRRLIQTLAVEDVEKTAPVNLNYLLWRNPENLKTRSILA CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEE LGFNPTDSLLLDDGFSRKAYKLRNPSRVLFDKLSRPEFGPIEEWFLSDQKVETEVAGKRV EECCCCCCEEECCCCCCCCEECCCCHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHCCHH IVEGLVELGPSFGADGNLITSRETFLRLFPANPPGSIEIGLVKLKKGSDPKLISKILNNS HHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHCCC LPNDVKVLTKNEFIEFEKNYWKNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPE CCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YATLLAMGYRLKSLFFVVAREGFLLALFGYLPAYFSGKILYLVIRNSTKLPIIMDADKTI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCHH LIFVLVLVMCMGSAGIAMRKLVDADPAEIF HHHHHHHHHHCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure SFSIFKYRKIPLAWLLLTRQPLRLVVAIAGISFAGILMFMQLGFRDGLFDTSVTIHKLL CCCCEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH DADLVLISPRSKSSISMSGFPKRRLIQTLAVEDVEKTAPVNLNYLLWRNPENLKTRSILA CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEE LGFNPTDSLLLDDGFSRKAYKLRNPSRVLFDKLSRPEFGPIEEWFLSDQKVETEVAGKRV EECCCCCCEEECCCCCCCCEECCCCHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHCCHH IVEGLVELGPSFGADGNLITSRETFLRLFPANPPGSIEIGLVKLKKGSDPKLISKILNNS HHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHCCC LPNDVKVLTKNEFIEFEKNYWKNSTAIGFIFSLGALMGFVVGCVVVYQILYSDVTDHLPE CCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YATLLAMGYRLKSLFFVVAREGFLLALFGYLPAYFSGKILYLVIRNSTKLPIIMDADKTI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCHH LIFVLVLVMCMGSAGIAMRKLVDADPAEIF HHHHHHHHHHCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA