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The map label for this gene is 78779079

Identifier: 78779079

GI number: 78779079

Start: 653983

End: 654240

Strand: Reverse

Name: 78779079

Synonym: PMT9312_0695

Alternate gene names: NA

Gene position: 654240-653983 (Counterclockwise)

Preceding gene: 78779080

Following gene: 78779078

Centisome position: 38.28

GC content: 28.68

Gene sequence:

>258_bases
GTGTCCAATAAATTTTATGAATGGTGGAAAAACCATAGAAAAGTTGTAACCTATGGAGTTTTTATCATCTTATTTGGTTT
TTATTTATCTCCTGTGGTCAATGAAGCAAAATATAAAAACCAATGCATTAAATACTCTACTAAAGGAGCCTTAACTAAAT
TCAATCAAGACGATATCGGAGAAACTTTATTAGAAGAAACAGGTTTAAACATTGCTGAACTAGCAAAGATTGAAGGTTAT
AAAAATTGCATAAATTAA

Upstream 100 bases:

>100_bases
ATACATTAAGGAAAAACAAAGAATTAACTAGTCCCTTAATTATTAAAGTATTTTGTTGACAATCAATTTAAAATAGGAGT
TAGTTAGTTAGTTAGTTATC

Downstream 100 bases:

>100_bases
AAAGTTTGCAAAAGTTATTCTGATTTTATGAATGATTAAGGGTGTGTTCAAACTATTTTTATTAATATCATTATTTGGAT
TTATATCAATAAGTCCAAAA

Product: Notch domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MSNKFYEWWKNHRKVVTYGVFIILFGFYLSPVVNEAKYKNQCIKYSTKGALTKFNQDDIGETLLEETGLNIAELAKIEGY
KNCIN

Sequences:

>Translated_85_residues
MSNKFYEWWKNHRKVVTYGVFIILFGFYLSPVVNEAKYKNQCIKYSTKGALTKFNQDDIGETLLEETGLNIAELAKIEGY
KNCIN
>Mature_84_residues
SNKFYEWWKNHRKVVTYGVFIILFGFYLSPVVNEAKYKNQCIKYSTKGALTKFNQDDIGETLLEETGLNIAELAKIEGYK
NCIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9891; Mature: 9760

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKFYEWWKNHRKVVTYGVFIILFGFYLSPVVNEAKYKNQCIKYSTKGALTKFNQDDIG
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
ETLLEETGLNIAELAKIEGYKNCIN
HHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNKFYEWWKNHRKVVTYGVFIILFGFYLSPVVNEAKYKNQCIKYSTKGALTKFNQDDIG
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
ETLLEETGLNIAELAKIEGYKNCIN
HHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA