Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
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Accession | NC_007577 |
Length | 1,709,204 |
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The map label for this gene is 78779070
Identifier: 78779070
GI number: 78779070
Start: 647697
End: 647825
Strand: Reverse
Name: 78779070
Synonym: PMT9312_0686
Alternate gene names: NA
Gene position: 647825-647697 (Counterclockwise)
Preceding gene: 78779071
Following gene: 78779069
Centisome position: 37.9
GC content: 37.21
Gene sequence:
>129_bases ATGGAAAACTCAAAATCAACTTATTGGCAAAATGCCGAGAGAACCAATGGAAGAATGGCAATGATGGGTTTATTCGCATT AGTAGTAAACTACGGCCTTTTTGGCTGGATCATACCAGGTATTTTTTAA
Upstream 100 bases:
>100_bases TATCACTATTTGGCATTTAAACAATAACTACTGCGATAGCACCAAGTATTGCTTACGCACTATAAATATTTAATCACCCT TATTAACGAACAATCAAAAA
Downstream 100 bases:
>100_bases AATGTTTTTACTTTCTATACCCTTTTACGATTTCCCATCTTCTCCCATACTAATAATTGGTGCTTTAGGAATTGTGGTAG CACTTGCGGTTTTTTTCCTT
Product: high light inducible protein-like
Products: NA
Alternate protein names: High Light Inducible Protein-Like
Number of amino acids: Translated: 42; Mature: 42
Protein sequence:
>42_residues MENSKSTYWQNAERTNGRMAMMGLFALVVNYGLFGWIIPGIF
Sequences:
>Translated_42_residues MENSKSTYWQNAERTNGRMAMMGLFALVVNYGLFGWIIPGIF >Mature_42_residues MENSKSTYWQNAERTNGRMAMMGLFALVVNYGLFGWIIPGIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4816; Mature: 4816
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 9.5 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 9.5 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSKSTYWQNAERTNGRMAMMGLFALVVNYGLFGWIIPGIF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MENSKSTYWQNAERTNGRMAMMGLFALVVNYGLFGWIIPGIF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA