| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779064
Identifier: 78779064
GI number: 78779064
Start: 640981
End: 641754
Strand: Direct
Name: 78779064
Synonym: PMT9312_0679
Alternate gene names: NA
Gene position: 640981-641754 (Clockwise)
Preceding gene: 78779062
Following gene: 78779066
Centisome position: 37.5
GC content: 32.43
Gene sequence:
>774_bases TTGAAAATTTTATCGATTATTAAACCAAATATAGTTTTATTCGTTGGTGATATTTCTGATGGGAGTGTCAAAATAATAAA AAAAATCAATGAGATCAAAATTCCTACTTTTGTGATTTTAGGAAATCATGATAGAGGGAAAGATTCTACAGGCGTAACTC TCTCAAAGCAGATACGTGTTCTTGGTGAAAAATATTGTGCATGGGATTTGAATGTTTTTAATAATCAAATAAATTTACTA TCCGCCAGACCATGTAGTTCTGGCGGGGGCTATTATCTTTCGAAAGAAGTTAAAGGTGTTTATGGACCTATCACCGAACA AGATTCAATAAATAAAATTATCAAATGTTCGGAAAAGACTGTAGAAGATATACCTTTAATAATTATGTCTCATGCGGGCC CTTCGGGTTTAGGCTCAGAACCTAAAAGCATTTGTGGGAAAGACTGGAAATTACCCTCTTTAGATTGGGGGGATAGAGAT TTGTCTGTGGCCATTTCTCAAATACAAAAAAGAAGAAAAGTTGATCTTGTAATTTTTGGTCATATGCACAATCGCCTTAA AAGAAATCTTGGTTTAAGAGAGATGTTTAAAATTGATAGCAAAGGAACAATTTATTTCAACACTGCTGTTGTGCCAAGAT ATAAAACTGATGAAGATGGGAAATTACTAATTAACTTTTCTTGGATTGAGTTTGAAAAAAAGGAATTAAGACATGTTTCT CATCGATGGTATTCAGAGTCTGGTGAAATTTTTGAAGAAGATAAATTTTTTTAG
Upstream 100 bases:
>100_bases TATCTCTAAATAGATTATATGCCTTTAAACAGAAAAAATTCTGACAAATTTAAAAATTGCTATTGTTGGTGACTGTCATG GTCAATGGTCTGAATTAGAC
Downstream 100 bases:
>100_bases GATTAGATAATTTTGATCATATTTTAAGTATTTTTGGGCTTTTCATATCTTGAAAATAACGTTTGAGACAAGATATAACC GGCAATGCCTGCGGCTGTAA
Product: putative transcripton factor
Products: NA
Alternate protein names: Metallophosphoesterase; Phosphoesterase; Ser/Thr Protein Phosphatase Family Protein; Transcripton Factor DevT-Like; Transcripton Factor For Heterocyst Differentiation
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MKILSIIKPNIVLFVGDISDGSVKIIKKINEIKIPTFVILGNHDRGKDSTGVTLSKQIRVLGEKYCAWDLNVFNNQINLL SARPCSSGGGYYLSKEVKGVYGPITEQDSINKIIKCSEKTVEDIPLIIMSHAGPSGLGSEPKSICGKDWKLPSLDWGDRD LSVAISQIQKRRKVDLVIFGHMHNRLKRNLGLREMFKIDSKGTIYFNTAVVPRYKTDEDGKLLINFSWIEFEKKELRHVS HRWYSESGEIFEEDKFF
Sequences:
>Translated_257_residues MKILSIIKPNIVLFVGDISDGSVKIIKKINEIKIPTFVILGNHDRGKDSTGVTLSKQIRVLGEKYCAWDLNVFNNQINLL SARPCSSGGGYYLSKEVKGVYGPITEQDSINKIIKCSEKTVEDIPLIIMSHAGPSGLGSEPKSICGKDWKLPSLDWGDRD LSVAISQIQKRRKVDLVIFGHMHNRLKRNLGLREMFKIDSKGTIYFNTAVVPRYKTDEDGKLLINFSWIEFEKKELRHVS HRWYSESGEIFEEDKFF >Mature_257_residues MKILSIIKPNIVLFVGDISDGSVKIIKKINEIKIPTFVILGNHDRGKDSTGVTLSKQIRVLGEKYCAWDLNVFNNQINLL SARPCSSGGGYYLSKEVKGVYGPITEQDSINKIIKCSEKTVEDIPLIIMSHAGPSGLGSEPKSICGKDWKLPSLDWGDRD LSVAISQIQKRRKVDLVIFGHMHNRLKRNLGLREMFKIDSKGTIYFNTAVVPRYKTDEDGKLLINFSWIEFEKKELRHVS HRWYSESGEIFEEDKFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29206; Mature: 29206
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILSIIKPNIVLFVGDISDGSVKIIKKINEIKIPTFVILGNHDRGKDSTGVTLSKQIRV CCCHHEECCCEEEEEEECCCCCHHHEEHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHH LGEKYCAWDLNVFNNQINLLSARPCSSGGGYYLSKEVKGVYGPITEQDSINKIIKCSEKT HHHHHEEEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCC VEDIPLIIMSHAGPSGLGSEPKSICGKDWKLPSLDWGDRDLSVAISQIQKRRKVDLVIFG CCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEC HMHNRLKRNLGLREMFKIDSKGTIYFNTAVVPRYKTDEDGKLLINFSWIEFEKKELRHVS CHHHHHHHCCCHHHHHEECCCCEEEEEEEEECCCCCCCCCEEEEEEEEEECCHHHHHHHH HRWYSESGEIFEEDKFF HHHHCCCCCCCCCCCCC >Mature Secondary Structure MKILSIIKPNIVLFVGDISDGSVKIIKKINEIKIPTFVILGNHDRGKDSTGVTLSKQIRV CCCHHEECCCEEEEEEECCCCCHHHEEHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHH LGEKYCAWDLNVFNNQINLLSARPCSSGGGYYLSKEVKGVYGPITEQDSINKIIKCSEKT HHHHHEEEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCC VEDIPLIIMSHAGPSGLGSEPKSICGKDWKLPSLDWGDRDLSVAISQIQKRRKVDLVIFG CCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEC HMHNRLKRNLGLREMFKIDSKGTIYFNTAVVPRYKTDEDGKLLINFSWIEFEKKELRHVS CHHHHHHHCCCHHHHHEECCCCEEEEEEEEECCCCCCCCCEEEEEEEEEECCHHHHHHHH HRWYSESGEIFEEDKFF HHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA