| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779026
Identifier: 78779026
GI number: 78779026
Start: 604881
End: 605540
Strand: Direct
Name: 78779026
Synonym: PMT9312_0641
Alternate gene names: NA
Gene position: 604881-605540 (Clockwise)
Preceding gene: 78779025
Following gene: 78779027
Centisome position: 35.39
GC content: 28.18
Gene sequence:
>660_bases TTGAAAAAGGAATTATCACATCGTTCTCATGAACTGAAAGCTCTTGGTTGGAATCAAGAAGATTTAACAAGATACGAAGA TTTATGGGACTACAGTCAAAGATGGGGATTAATAAATTTAGAAAGAGAAGACAGACAGTTTTTAAAGAAAGCAGAAAAGT TACTCCCAAAGATCCAAAATAAAAAGATATCAGTTAAAAAAACTATTGAAGAAAAATCATATTATTTATGGTTAAATTTT TACCTCGATGAAATTAATATTTTTAGTAATTCTAATCTTCCAAAAAATAAACATGGTGTTTGGACACTCTTAATTGAAGA GGAAATTAAACTTCTTAAGGAATTACAACCAGTTATGGGTCTTCCAGATACTTTAAAAGCCAAAAATCTATTTAAGAATA GAAAGGATCTCATAAATAAGGCTTTTAGCCAATTTGACGCTAAAAACAACGATAAGGGTTTCAATTTTGATGATGCTCTA AACAAATCTGAAAAAGATGTTGGTAAGAATTGGAAATCAATTACTGAAAAAGATCCTGAAGCTAATAAAACTTTTCCAAT AATAGATTCTGCAAATATTGACAAACTCAGATCTGCGATAAAAGATGATTTGAGTTTATATATGAAAGATAATTACCCTT CATTAAAAAAGGATTTATAA
Upstream 100 bases:
>100_bases ATAATTGATTATTTATTTAATTTACTAAAAAGTTAAGTTCTTCATTTATTTACTAATCTTGATTGCGGGGTTAGACTTAT TATGGTTTTAAAAGGTTTTT
Downstream 100 bases:
>100_bases ATATTTATCTTTTTTTTGTTTTTTTTTTGGACTTTTTTAAGTTAAATAGATAATAGGATTATTTAAAAATTTTGAGCAAC CAAAAGTTCGAGACTCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MKKELSHRSHELKALGWNQEDLTRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQNKKISVKKTIEEKSYYLWLNF YLDEINIFSNSNLPKNKHGVWTLLIEEEIKLLKELQPVMGLPDTLKAKNLFKNRKDLINKAFSQFDAKNNDKGFNFDDAL NKSEKDVGKNWKSITEKDPEANKTFPIIDSANIDKLRSAIKDDLSLYMKDNYPSLKKDL
Sequences:
>Translated_219_residues MKKELSHRSHELKALGWNQEDLTRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQNKKISVKKTIEEKSYYLWLNF YLDEINIFSNSNLPKNKHGVWTLLIEEEIKLLKELQPVMGLPDTLKAKNLFKNRKDLINKAFSQFDAKNNDKGFNFDDAL NKSEKDVGKNWKSITEKDPEANKTFPIIDSANIDKLRSAIKDDLSLYMKDNYPSLKKDL >Mature_219_residues MKKELSHRSHELKALGWNQEDLTRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQNKKISVKKTIEEKSYYLWLNF YLDEINIFSNSNLPKNKHGVWTLLIEEEIKLLKELQPVMGLPDTLKAKNLFKNRKDLINKAFSQFDAKNNDKGFNFDDAL NKSEKDVGKNWKSITEKDPEANKTFPIIDSANIDKLRSAIKDDLSLYMKDNYPSLKKDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25927; Mature: 25927
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKELSHRSHELKALGWNQEDLTRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQN CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHCC KKISVKKTIEEKSYYLWLNFYLDEINIFSNSNLPKNKHGVWTLLIEEEIKLLKELQPVMG CCCHHHHHHCCCCEEEEEEEEEEHHHEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHC LPDTLKAKNLFKNRKDLINKAFSQFDAKNNDKGFNFDDALNKSEKDVGKNWKSITEKDPE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHCCHHHHHCCCCCC ANKTFPIIDSANIDKLRSAIKDDLSLYMKDNYPSLKKDL CCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHCC >Mature Secondary Structure MKKELSHRSHELKALGWNQEDLTRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQN CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHCC KKISVKKTIEEKSYYLWLNFYLDEINIFSNSNLPKNKHGVWTLLIEEEIKLLKELQPVMG CCCHHHHHHCCCCEEEEEEEEEEHHHEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHC LPDTLKAKNLFKNRKDLINKAFSQFDAKNNDKGFNFDDALNKSEKDVGKNWKSITEKDPE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHCCHHHHHCCCCCC ANKTFPIIDSANIDKLRSAIKDDLSLYMKDNYPSLKKDL CCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA