Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is 78779026

Identifier: 78779026

GI number: 78779026

Start: 604881

End: 605540

Strand: Direct

Name: 78779026

Synonym: PMT9312_0641

Alternate gene names: NA

Gene position: 604881-605540 (Clockwise)

Preceding gene: 78779025

Following gene: 78779027

Centisome position: 35.39

GC content: 28.18

Gene sequence:

>660_bases
TTGAAAAAGGAATTATCACATCGTTCTCATGAACTGAAAGCTCTTGGTTGGAATCAAGAAGATTTAACAAGATACGAAGA
TTTATGGGACTACAGTCAAAGATGGGGATTAATAAATTTAGAAAGAGAAGACAGACAGTTTTTAAAGAAAGCAGAAAAGT
TACTCCCAAAGATCCAAAATAAAAAGATATCAGTTAAAAAAACTATTGAAGAAAAATCATATTATTTATGGTTAAATTTT
TACCTCGATGAAATTAATATTTTTAGTAATTCTAATCTTCCAAAAAATAAACATGGTGTTTGGACACTCTTAATTGAAGA
GGAAATTAAACTTCTTAAGGAATTACAACCAGTTATGGGTCTTCCAGATACTTTAAAAGCCAAAAATCTATTTAAGAATA
GAAAGGATCTCATAAATAAGGCTTTTAGCCAATTTGACGCTAAAAACAACGATAAGGGTTTCAATTTTGATGATGCTCTA
AACAAATCTGAAAAAGATGTTGGTAAGAATTGGAAATCAATTACTGAAAAAGATCCTGAAGCTAATAAAACTTTTCCAAT
AATAGATTCTGCAAATATTGACAAACTCAGATCTGCGATAAAAGATGATTTGAGTTTATATATGAAAGATAATTACCCTT
CATTAAAAAAGGATTTATAA

Upstream 100 bases:

>100_bases
ATAATTGATTATTTATTTAATTTACTAAAAAGTTAAGTTCTTCATTTATTTACTAATCTTGATTGCGGGGTTAGACTTAT
TATGGTTTTAAAAGGTTTTT

Downstream 100 bases:

>100_bases
ATATTTATCTTTTTTTTGTTTTTTTTTTGGACTTTTTTAAGTTAAATAGATAATAGGATTATTTAAAAATTTTGAGCAAC
CAAAAGTTCGAGACTCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKKELSHRSHELKALGWNQEDLTRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQNKKISVKKTIEEKSYYLWLNF
YLDEINIFSNSNLPKNKHGVWTLLIEEEIKLLKELQPVMGLPDTLKAKNLFKNRKDLINKAFSQFDAKNNDKGFNFDDAL
NKSEKDVGKNWKSITEKDPEANKTFPIIDSANIDKLRSAIKDDLSLYMKDNYPSLKKDL

Sequences:

>Translated_219_residues
MKKELSHRSHELKALGWNQEDLTRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQNKKISVKKTIEEKSYYLWLNF
YLDEINIFSNSNLPKNKHGVWTLLIEEEIKLLKELQPVMGLPDTLKAKNLFKNRKDLINKAFSQFDAKNNDKGFNFDDAL
NKSEKDVGKNWKSITEKDPEANKTFPIIDSANIDKLRSAIKDDLSLYMKDNYPSLKKDL
>Mature_219_residues
MKKELSHRSHELKALGWNQEDLTRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQNKKISVKKTIEEKSYYLWLNF
YLDEINIFSNSNLPKNKHGVWTLLIEEEIKLLKELQPVMGLPDTLKAKNLFKNRKDLINKAFSQFDAKNNDKGFNFDDAL
NKSEKDVGKNWKSITEKDPEANKTFPIIDSANIDKLRSAIKDDLSLYMKDNYPSLKKDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25927; Mature: 25927

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKELSHRSHELKALGWNQEDLTRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQN
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHCC
KKISVKKTIEEKSYYLWLNFYLDEINIFSNSNLPKNKHGVWTLLIEEEIKLLKELQPVMG
CCCHHHHHHCCCCEEEEEEEEEEHHHEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHC
LPDTLKAKNLFKNRKDLINKAFSQFDAKNNDKGFNFDDALNKSEKDVGKNWKSITEKDPE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHCCHHHHHCCCCCC
ANKTFPIIDSANIDKLRSAIKDDLSLYMKDNYPSLKKDL
CCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHCC
>Mature Secondary Structure
MKKELSHRSHELKALGWNQEDLTRYEDLWDYSQRWGLINLEREDRQFLKKAEKLLPKIQN
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHCC
KKISVKKTIEEKSYYLWLNFYLDEINIFSNSNLPKNKHGVWTLLIEEEIKLLKELQPVMG
CCCHHHHHHCCCCEEEEEEEEEEHHHEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHC
LPDTLKAKNLFKNRKDLINKAFSQFDAKNNDKGFNFDDALNKSEKDVGKNWKSITEKDPE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHCCHHHHHCCCCCC
ANKTFPIIDSANIDKLRSAIKDDLSLYMKDNYPSLKKDL
CCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA