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The map label for this gene is crtL [H]

Identifier: 78779018

GI number: 78779018

Start: 596188

End: 597471

Strand: Reverse

Name: crtL [H]

Synonym: PMT9312_0633

Alternate gene names: 78779018

Gene position: 597471-596188 (Counterclockwise)

Preceding gene: 78779020

Following gene: 78779017

Centisome position: 34.96

GC content: 34.66

Gene sequence:

>1284_bases
ATGTCAAAACAAAGCTTACCAGATGTTCTTGTTTTGGGTGCAGGACCTGCGGGCATGGCAATTGCATCAGCTTTAGGCAA
AGAGGAATTAAATGTAGAAGTCCTTTCTCCTAATGGACCAGATGAACCTTGGCCAAATACTTATGGTATTTGGGGAGAAG
AGGTTGATCAACTTGGGCTTCAGGATTTACTAGAATATAGATGGAAGAATACTGTAAGTTTTTTTGGGCATGGCGCTTTA
GAAGAGCAGCACGATGAGAATAAAGCTACTGAACATTCATTAGATTACGGACTATTTGATAAGAAGAAACTCCATAATTT
TTGGCTTAATGAATGCAATAAATCTTTTATTAAATGGCATCAAGGCTATGCTGATAAAATCCATTTTGAAAAATATAAAA
GTACTGTCACAACAAATGATGGCAAGACTTACTCTGCAAGATTAGTAGTAGATGCGACAGGATATGATCCTGTTTTTCTT
AAATTAAAATCATGTGGCCCTTTAGCAGTCCAAACTTGTTACGGGATAGTAGGCAATTTTAGTAAACCCCCGCTTAAAAA
GGGTCAGTTTGTATTAATGGATTATAGAAATGACCATCTTAATGAAGAGCAAAAAAAAGAACCACCCACTTTTCTTTATG
CAATGGACATGGGAAACGGGAAATATTTTCTTGAAGAGACATCTCTTGGTTTAGTAAATCCTTTAACAATGGAAAATTTA
AAAGAAAGATTAGAGAAAAGGCTATCTTATCGAAATATATCTATTACAAGTATGCAACACGAAGAACTTGGTTTGTTTCT
ACCGATGAATATGCCAATACCAGATTTCAAACAACAAATACTTGGTTATGGTGGAGCTGCTTCAATGGTTCATCCTGCAT
CTGGATACTTAATTGGTAATCTTTTAAGAAGAGCTCCACTTGTTGCAAAAGCAATATCAGAAGCAATTAAAAACAAAAAT
CTTAGTACCTATCATATTGCTAGAAGGGGTTGGGAAACTTTATGGTCAAAAGAATTAATTAGAAAGAAATCACTTTACCA
GTTTGGTTTGGAAAAACTCATGAGGTTTGATGAAAAACTACTTAGAGAATTTTTTGGCAGTTTTTTCCAACTACCCAAAA
ATCAATGGTATGGTTTTCTAACTGATACTTTATCCTTAAGAGAGATTGTATACGCGATGTGCATAATGTTTATAAAGGCC
CCATGGAGTGTAAAGAAAGGTCTTATGATTATGCATGGTAGAGAGTTTAAAATGTTGCTTAGGATAATATTTCCAAACAT
ATGA

Upstream 100 bases:

>100_bases
GAGTCTACTCTCATTACAAGTATTGAATGAATAATAAAAAACCAGTAGCAGAAATTATATTTTGTTTCACAAATTCCTTT
AATAAGAAGATTTATATTTA

Downstream 100 bases:

>100_bases
TTTCTAAATGAGAACCATACTAATAAGTGGAGCTAATAGAGGTATTGGACTAAATATTGCACATAAAGAATTAAAAACAG
GCAACAGAATTAGTGTTGGT

Product: lycopene cyclase (CrtL-type)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSKQSLPDVLVLGAGPAGMAIASALGKEELNVEVLSPNGPDEPWPNTYGIWGEEVDQLGLQDLLEYRWKNTVSFFGHGAL
EEQHDENKATEHSLDYGLFDKKKLHNFWLNECNKSFIKWHQGYADKIHFEKYKSTVTTNDGKTYSARLVVDATGYDPVFL
KLKSCGPLAVQTCYGIVGNFSKPPLKKGQFVLMDYRNDHLNEEQKKEPPTFLYAMDMGNGKYFLEETSLGLVNPLTMENL
KERLEKRLSYRNISITSMQHEELGLFLPMNMPIPDFKQQILGYGGAASMVHPASGYLIGNLLRRAPLVAKAISEAIKNKN
LSTYHIARRGWETLWSKELIRKKSLYQFGLEKLMRFDEKLLREFFGSFFQLPKNQWYGFLTDTLSLREIVYAMCIMFIKA
PWSVKKGLMIMHGREFKMLLRIIFPNI

Sequences:

>Translated_427_residues
MSKQSLPDVLVLGAGPAGMAIASALGKEELNVEVLSPNGPDEPWPNTYGIWGEEVDQLGLQDLLEYRWKNTVSFFGHGAL
EEQHDENKATEHSLDYGLFDKKKLHNFWLNECNKSFIKWHQGYADKIHFEKYKSTVTTNDGKTYSARLVVDATGYDPVFL
KLKSCGPLAVQTCYGIVGNFSKPPLKKGQFVLMDYRNDHLNEEQKKEPPTFLYAMDMGNGKYFLEETSLGLVNPLTMENL
KERLEKRLSYRNISITSMQHEELGLFLPMNMPIPDFKQQILGYGGAASMVHPASGYLIGNLLRRAPLVAKAISEAIKNKN
LSTYHIARRGWETLWSKELIRKKSLYQFGLEKLMRFDEKLLREFFGSFFQLPKNQWYGFLTDTLSLREIVYAMCIMFIKA
PWSVKKGLMIMHGREFKMLLRIIFPNI
>Mature_426_residues
SKQSLPDVLVLGAGPAGMAIASALGKEELNVEVLSPNGPDEPWPNTYGIWGEEVDQLGLQDLLEYRWKNTVSFFGHGALE
EQHDENKATEHSLDYGLFDKKKLHNFWLNECNKSFIKWHQGYADKIHFEKYKSTVTTNDGKTYSARLVVDATGYDPVFLK
LKSCGPLAVQTCYGIVGNFSKPPLKKGQFVLMDYRNDHLNEEQKKEPPTFLYAMDMGNGKYFLEETSLGLVNPLTMENLK
ERLEKRLSYRNISITSMQHEELGLFLPMNMPIPDFKQQILGYGGAASMVHPASGYLIGNLLRRAPLVAKAISEAIKNKNL
STYHIARRGWETLWSKELIRKKSLYQFGLEKLMRFDEKLLREFFGSFFQLPKNQWYGFLTDTLSLREIVYAMCIMFIKAP
WSVKKGLMIMHGREFKMLLRIIFPNI

Specific function: Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lycopene cyclase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010108
- InterPro:   IPR008671
- InterPro:   IPR000103 [H]

Pfam domain/function: PF05834 Lycopene_cycl [H]

EC number: NA

Molecular weight: Translated: 48994; Mature: 48863

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQSLPDVLVLGAGPAGMAIASALGKEELNVEVLSPNGPDEPWPNTYGIWGEEVDQLGL
CCCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
QDLLEYRWKNTVSFFGHGALEEQHDENKATEHSLDYGLFDKKKLHNFWLNECNKSFIKWH
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QGYADKIHFEKYKSTVTTNDGKTYSARLVVDATGYDPVFLKLKSCGPLAVQTCYGIVGNF
CCCHHHHHHHHHHCCEECCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCC
SKPPLKKGQFVLMDYRNDHLNEEQKKEPPTFLYAMDMGNGKYFLEETSLGLVNPLTMENL
CCCCCCCCCEEEEECCCCCCCCHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHH
KERLEKRLSYRNISITSMQHEELGLFLPMNMPIPDFKQQILGYGGAASMVHPASGYLIGN
HHHHHHHHHHCCCEEEEECHHHCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHH
LLRRAPLVAKAISEAIKNKNLSTYHIARRGWETLWSKELIRKKSLYQFGLEKLMRFDEKL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LREFFGSFFQLPKNQWYGFLTDTLSLREIVYAMCIMFIKAPWSVKKGLMIMHGREFKMLL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECHHHHHHH
RIIFPNI
HHHCCCC
>Mature Secondary Structure 
SKQSLPDVLVLGAGPAGMAIASALGKEELNVEVLSPNGPDEPWPNTYGIWGEEVDQLGL
CCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
QDLLEYRWKNTVSFFGHGALEEQHDENKATEHSLDYGLFDKKKLHNFWLNECNKSFIKWH
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QGYADKIHFEKYKSTVTTNDGKTYSARLVVDATGYDPVFLKLKSCGPLAVQTCYGIVGNF
CCCHHHHHHHHHHCCEECCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCC
SKPPLKKGQFVLMDYRNDHLNEEQKKEPPTFLYAMDMGNGKYFLEETSLGLVNPLTMENL
CCCCCCCCCEEEEECCCCCCCCHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHH
KERLEKRLSYRNISITSMQHEELGLFLPMNMPIPDFKQQILGYGGAASMVHPASGYLIGN
HHHHHHHHHHCCCEEEEECHHHCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHH
LLRRAPLVAKAISEAIKNKNLSTYHIARRGWETLWSKELIRKKSLYQFGLEKLMRFDEKL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LREFFGSFFQLPKNQWYGFLTDTLSLREIVYAMCIMFIKAPWSVKKGLMIMHGREFKMLL
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECHHHHHHH
RIIFPNI
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7919981 [H]