Click here to switch to the map view.

The map label for this gene is 78779016

Identifier: 78779016

GI number: 78779016

Start: 594934

End: 595476

Strand: Direct

Name: 78779016

Synonym: PMT9312_0631

Alternate gene names: NA

Gene position: 594934-595476 (Clockwise)

Preceding gene: 78779014

Following gene: 78779019

Centisome position: 34.81

GC content: 28.73

Gene sequence:

>543_bases
ATGTCGGGATATGTTTACCTCATAAGATTCGGAGATCTTTATAGAATTGGGAAGACGGATAATCTTGACAAGAAAATTAA
GAAATTAAAACCAGATGAATTATTAACATCAATTATGACAAAGGAGCCAGAAACTCTTGAAGCAAGGTTACTAAGAAAAT
ATAAGTCGCAAAGAATTCCTGAAACTGGTTATTTAAAGCTTTCTAAAACACAGATTAGAGAATGTAAAAAACAATTTGAA
TTAAAGGGAAGCTTACCTCACACTTTAGATGCTGAAGTTTCCATTACTCTATTTGCTTCTTTTTTATTATTTTCATTAAG
TGACTTGATTTTTAATTATTTAAATTTTGGATTTTTAAAATCCATATCTTATGCATTTGGAGTGGCATCTTTACCAATGG
TTGTGTTATTTATTACGGGTAGTTTTGGGGGATATTTTTCTGAAGACTTATCTCTTTTTTCTTTAATAACTAATCGAATA
AAAGGCTTATTTATTGCAATTGCAATGTTAACAATGGCTTACTTAATTTTTAATTTAGGCTAA

Upstream 100 bases:

>100_bases
AAATGAATATAAAATATCGTTTGTCATTTTGTATAAACTTTTATTTGCTAAATTCTTTTAGTATTATTTAAATAAGAATA
TATTTAATTTTACAACGCAA

Downstream 100 bases:

>100_bases
ATTTCATAATTACAATTTAAGGCAATTTCAAATGGAACTGATTGTGTCGGCAGCTTCAGAATAGTTGAGCATATCTCAGC
AATATCCTGAGGTTGGGTCA

Product: NADH-ubiquinone/plastoquinone-like

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSGYVYLIRFGDLYRIGKTDNLDKKIKKLKPDELLTSIMTKEPETLEARLLRKYKSQRIPETGYLKLSKTQIRECKKQFE
LKGSLPHTLDAEVSITLFASFLLFSLSDLIFNYLNFGFLKSISYAFGVASLPMVVLFITGSFGGYFSEDLSLFSLITNRI
KGLFIAIAMLTMAYLIFNLG

Sequences:

>Translated_180_residues
MSGYVYLIRFGDLYRIGKTDNLDKKIKKLKPDELLTSIMTKEPETLEARLLRKYKSQRIPETGYLKLSKTQIRECKKQFE
LKGSLPHTLDAEVSITLFASFLLFSLSDLIFNYLNFGFLKSISYAFGVASLPMVVLFITGSFGGYFSEDLSLFSLITNRI
KGLFIAIAMLTMAYLIFNLG
>Mature_179_residues
SGYVYLIRFGDLYRIGKTDNLDKKIKKLKPDELLTSIMTKEPETLEARLLRKYKSQRIPETGYLKLSKTQIRECKKQFEL
KGSLPHTLDAEVSITLFASFLLFSLSDLIFNYLNFGFLKSISYAFGVASLPMVVLFITGSFGGYFSEDLSLFSLITNRIK
GLFIAIAMLTMAYLIFNLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20490; Mature: 20358

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYVYLIRFGDLYRIGKTDNLDKKIKKLKPDELLTSIMTKEPETLEARLLRKYKSQRIP
CCCEEEEEEECCEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
ETGYLKLSKTQIRECKKQFELKGSLPHTLDAEVSITLFASFLLFSLSDLIFNYLNFGFLK
CCCCEEECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SISYAFGVASLPMVVLFITGSFGGYFSEDLSLFSLITNRIKGLFIAIAMLTMAYLIFNLG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGYVYLIRFGDLYRIGKTDNLDKKIKKLKPDELLTSIMTKEPETLEARLLRKYKSQRIP
CCEEEEEEECCEEECCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
ETGYLKLSKTQIRECKKQFELKGSLPHTLDAEVSITLFASFLLFSLSDLIFNYLNFGFLK
CCCCEEECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SISYAFGVASLPMVVLFITGSFGGYFSEDLSLFSLITNRIKGLFIAIAMLTMAYLIFNLG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA