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The map label for this gene is ccmK [H]

Identifier: 78778934

GI number: 78778934

Start: 513352

End: 513663

Strand: Direct

Name: ccmK [H]

Synonym: PMT9312_0549

Alternate gene names: 78778934

Gene position: 513352-513663 (Clockwise)

Preceding gene: 78778932

Following gene: 78778935

Centisome position: 30.03

GC content: 48.08

Gene sequence:

>312_bases
ATGGCTACAGAAACAATGGGTATCGCTCTCGGCATGATCGAGACACGCGGACTTGTACCTGCAATCGAAGCAGCAGACGC
AATGACCAAGGCAGCAGAAGTTCGTCTTATTGGTCGTGAATTCGTAGGTGGCGGTTATGTCACAGTATTAGTTAGAGGCG
AAACAGGAGCAGTTAACGCAGCTGTTAGAGCTGGTGCTGATGCTTGTGAAAGAGTTGGTGATGGTTTAGTCGCAGCTCAC
ATTATTGCTCGTCCTCACAGAGAAGTTGAACCTGCCCTAGGTAACGGTGAATTTCTTGGTCAAAAGGACTAA

Upstream 100 bases:

>100_bases
AAAAGATTAATAGACTTTTTAGGTAAAAACACTTGACTTATAAGTACTTAATGGACCATTCTTGCAAACGAACATTCCAC
ATTTAGTAATTTAGTAGGCA

Downstream 100 bases:

>100_bases
TTAAGTAAAGCAAGATTTATAAATTTTGCACAATAATTATTTTCCCTACACAGACCTAAATTTATCCTTATGAGTAAGAA
GTATGATGCAGGGGTAAAGG

Product: carboxysome shell protein CsoS1

Products: NA

Alternate protein names: Carboxysome shell protein CsoS1 [H]

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPALGNGEFLGQKD

Sequences:

>Translated_103_residues
MATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPALGNGEFLGQKD
>Mature_102_residues
ATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHI
IARPHREVEPALGNGEFLGQKD

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=82, Percent_Identity=57.3170731707317, Blast_Score=79, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 10586; Mature: 10455

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNA
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEECHHCCCCCEEEEEEECCCCCCHH
AVRAGADACERVGDGLVAAHIIARPHREVEPALGNGEFLGQKD
HHHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNA
CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEECHHCCCCCEEEEEEECCCCCCHH
AVRAGADACERVGDGLVAAHIIARPHREVEPALGNGEFLGQKD
HHHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917486 [H]