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The map label for this gene is yggV [C]

Identifier: 78778933

GI number: 78778933

Start: 512438

End: 513022

Strand: Reverse

Name: yggV [C]

Synonym: PMT9312_0548

Alternate gene names: 78778933

Gene position: 513022-512438 (Counterclockwise)

Preceding gene: 78778942

Following gene: 78778931

Centisome position: 30.02

GC content: 35.73

Gene sequence:

>585_bases
TTGAACCTTCCAGTTCTAACAATTGCCAGTGGCAACCAAAGAAAGGTATCTGAAATTTCAGAAATGCTTGATGTTTTGTC
TTTAAGAGTAGAGAAGCAACCAGAATATTTAAATGTCGAAGAGACTGGAAATACATATTTTGAGAATGCACTTCTAAAAG
CAAAGGCAGCTGCGTTAGAGACAAAAACTTGGGCATTAGCTGATGACTCGGGTCTTGAAGTAGATATTTTAGATGGTCGA
CCAGGCATATATTCTGCTCGATATGCCAAAAACAACGCTGAAAAAATCAAAAAATTAATCAATGAACTTTCTGACAGTCC
TTATAGAAGCGCAAGATTTATAAGCTGTATGGTTTTATGTGATCCCTCAGGAAACTTAGTGAAGGATACAACTGGAATAT
GCTGGGGAGAAATTCTTAAGAAGCCCAAATACCCAAAGGGGGAATTCGAATCAATTTTTTGGGTTAAAGAAGCTAATTGT
GTTTACGGAGAGCTATCACAATCACAACTAAGTAAATTAGGCAGTAGGGGTAAAGCTGCAAAAATTATTTCGCCTTTTTT
AAAAAAAGAAATAGGTTTAAATTAA

Upstream 100 bases:

>100_bases
AGGCAGGCCCTGTCTACACAGGTGTGGAATGTTCAACCTTTCCTGTCTCCGTATCAAGCTTTGAAGTAAGATAATATTCA
CCATAAATTTATTTGTTATT

Downstream 100 bases:

>100_bases
AAAAAATTCTCAATAATTCGAAATTTCTTCAATTGCTCTTATAGCTGCAGCTGCCGCTTCTTCTACATCCCCTTCTTTCC
CCGCAAGAGTTAATCTACCA

Product: HAM1 family protein

Products: NA

Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MNLPVLTIASGNQRKVSEISEMLDVLSLRVEKQPEYLNVEETGNTYFENALLKAKAAALETKTWALADDSGLEVDILDGR
PGIYSARYAKNNAEKIKKLINELSDSPYRSARFISCMVLCDPSGNLVKDTTGICWGEILKKPKYPKGEFESIFWVKEANC
VYGELSQSQLSKLGSRGKAAKIISPFLKKEIGLN

Sequences:

>Translated_194_residues
MNLPVLTIASGNQRKVSEISEMLDVLSLRVEKQPEYLNVEETGNTYFENALLKAKAAALETKTWALADDSGLEVDILDGR
PGIYSARYAKNNAEKIKKLINELSDSPYRSARFISCMVLCDPSGNLVKDTTGICWGEILKKPKYPKGEFESIFWVKEANC
VYGELSQSQLSKLGSRGKAAKIISPFLKKEIGLN
>Mature_194_residues
MNLPVLTIASGNQRKVSEISEMLDVLSLRVEKQPEYLNVEETGNTYFENALLKAKAAALETKTWALADDSGLEVDILDGR
PGIYSARYAKNNAEKIKKLINELSDSPYRSARFISCMVLCDPSGNLVKDTTGICWGEILKKPKYPKGEFESIFWVKEANC
VYGELSQSQLSKLGSRGKAAKIISPFLKKEIGLN

Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions [H]

COG id: COG0127

COG function: function code F; Xanthosine triphosphate pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAM1 NTPase family [H]

Homologues:

Organism=Escherichia coli, GI1789324, Length=199, Percent_Identity=35.678391959799, Blast_Score=101, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002637
- InterPro:   IPR020922 [H]

Pfam domain/function: PF01725 Ham1p_like [H]

EC number: =3.6.1.15 [H]

Molecular weight: Translated: 21526; Mature: 21526

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPVLTIASGNQRKVSEISEMLDVLSLRVEKQPEYLNVEETGNTYFENALLKAKAAALE
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECEECCCCHHHHHHHHHHHHHHHC
TKTWALADDSGLEVDILDGRPGIYSARYAKNNAEKIKKLINELSDSPYRSARFISCMVLC
CCEEEEECCCCCEEEEECCCCCCEEHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEE
DPSGNLVKDTTGICWGEILKKPKYPKGEFESIFWVKEANCVYGELSQSQLSKLGSRGKAA
CCCCCEECCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCEECCCCHHHHHHHCCCCCHH
KIISPFLKKEIGLN
HHHHHHHHHHCCCC
>Mature Secondary Structure
MNLPVLTIASGNQRKVSEISEMLDVLSLRVEKQPEYLNVEETGNTYFENALLKAKAAALE
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECEECCCCHHHHHHHHHHHHHHHC
TKTWALADDSGLEVDILDGRPGIYSARYAKNNAEKIKKLINELSDSPYRSARFISCMVLC
CCEEEEECCCCCEEEEECCCCCCEEHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEE
DPSGNLVKDTTGICWGEILKKPKYPKGEFESIFWVKEANCVYGELSQSQLSKLGSRGKAA
CCCCCEECCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCEECCCCHHHHHHHCCCCCHH
KIISPFLKKEIGLN
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA