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The map label for this gene is 78778816

Identifier: 78778816

GI number: 78778816

Start: 406636

End: 407094

Strand: Reverse

Name: 78778816

Synonym: PMT9312_0431

Alternate gene names: NA

Gene position: 407094-406636 (Counterclockwise)

Preceding gene: 78778818

Following gene: 78778813

Centisome position: 23.82

GC content: 29.41

Gene sequence:

>459_bases
GTGAATAGAAGGAATCCACATCCATTAAAAAATTGTCTTGATAATTTCAAAAAATCCTGCGGAGACTTAGATAAACTCAC
TAAAATCAACGCAAACTGGAAGAACTTAATCGGCTTAGAACTATTTCAAGAATGTAAACCATTAAATATTGAAAAAAAAA
TACTTACTATTGCAGTAAATCATCCACAGTGGCGCCAAGCTTTAATCTATAACAAGCATAAATTAAAAGAGAGAATTGAG
AAAATTGGAATAACTTTGAATGAAATAAAAATAATACAAAATTATGAAATTAAAAATAAAAATATCAAAGCTACTAATGC
AAAGATAGTTTGGGCAAAGCATCCAAGCAGAATCAATCAAAATAATATGTGCATTTGTACTCTTTGTAATTCCCCTACTC
CTGAGGGCGAAATCAAAAGATGGGGAAAGTGTTCTTTTTGTTGGAGAAAAAATAATTAA

Upstream 100 bases:

>100_bases
CAAATTCTTTATTAAAACAACGAGCATCTTTTTAAAGATTAGATTAACTTTAGTCTTAATAAGTAAATATTACAAATTGG
ACAAAAAGTATTTGCCAATA

Downstream 100 bases:

>100_bases
AAACTAAATTCTTTATTTAGTTAAAATTAGTATCCCCATTTGCCCCCCCAAAATAGTCCTATATTCAGCTTTTTTAAATC
CAACTTCCTTAGCAATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MNRRNPHPLKNCLDNFKKSCGDLDKLTKINANWKNLIGLELFQECKPLNIEKKILTIAVNHPQWRQALIYNKHKLKERIE
KIGITLNEIKIIQNYEIKNKNIKATNAKIVWAKHPSRINQNNMCICTLCNSPTPEGEIKRWGKCSFCWRKNN

Sequences:

>Translated_152_residues
MNRRNPHPLKNCLDNFKKSCGDLDKLTKINANWKNLIGLELFQECKPLNIEKKILTIAVNHPQWRQALIYNKHKLKERIE
KIGITLNEIKIIQNYEIKNKNIKATNAKIVWAKHPSRINQNNMCICTLCNSPTPEGEIKRWGKCSFCWRKNN
>Mature_152_residues
MNRRNPHPLKNCLDNFKKSCGDLDKLTKINANWKNLIGLELFQECKPLNIEKKILTIAVNHPQWRQALIYNKHKLKERIE
KIGITLNEIKIIQNYEIKNKNIKATNAKIVWAKHPSRINQNNMCICTLCNSPTPEGEIKRWGKCSFCWRKNN

Specific function: Unknown

COG id: COG5512

COG function: function code R; Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17863; Mature: 17863

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRNPHPLKNCLDNFKKSCGDLDKLTKINANWKNLIGLELFQECKPLNIEKKILTIAVN
CCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEC
HPQWRQALIYNKHKLKERIEKIGITLNEIKIIQNYEIKNKNIKATNAKIVWAKHPSRINQ
CCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCEECCCCEEECCEEEEEECCCCCCCC
NNMCICTLCNSPTPEGEIKRWGKCSFCWRKNN
CCEEEEEECCCCCCCCHHCCCCCEEEEEECCC
>Mature Secondary Structure
MNRRNPHPLKNCLDNFKKSCGDLDKLTKINANWKNLIGLELFQECKPLNIEKKILTIAVN
CCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEC
HPQWRQALIYNKHKLKERIEKIGITLNEIKIIQNYEIKNKNIKATNAKIVWAKHPSRINQ
CCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCEECCCCEEECCEEEEEECCCCCCCC
NNMCICTLCNSPTPEGEIKRWGKCSFCWRKNN
CCEEEEEECCCCCCCCHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA