Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
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Accession | NC_007577 |
Length | 1,709,204 |
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The map label for this gene is 78778578
Identifier: 78778578
GI number: 78778578
Start: 183029
End: 183472
Strand: Direct
Name: 78778578
Synonym: PMT9312_0192
Alternate gene names: NA
Gene position: 183029-183472 (Clockwise)
Preceding gene: 78778573
Following gene: 78778580
Centisome position: 10.71
GC content: 29.28
Gene sequence:
>444_bases ATGAGATTTAAAAGAGATATTACCTATAAGAAAATTCTATCATTATTTAGGAATCAGAATGGAAGTCCTTTCTTTAATGC TAAAGGTTTAGCTATAGGGGTATTTAGTGGCTGCTTTCCTTTTTTTGGGTTTCAGACTTTAATAGGGGTATTTTTTGCTA AAATAGCTAAGGGAAATATTGTTCTAGCTGCAATTGGTACCTGGATCAGCAACCCTTTTACTTATATTCCACTTTATTAT TTTAACTATAAAGTTGGTTCGATTTTTTTAACTAATTCTTCTAATAAAATTCTTGAAAAAGGTTTAGTTATTGATGACTT ATGGAAACAAGGTAGAATTTTTTCCCTGAAATTACTCTTAGGTTCATCTTGTGTAGGTATTTTATTAGCTTTGATTTGCG GCAGTATTGTTTTCTTTATCTACAAGATAAAAAGTAAAAGATAG
Upstream 100 bases:
>100_bases CTATGGTATCTTCTGTAGTAACGATCGAATCCATCTCTAGCTTTGTTATGGATAATTAAGTAAGATTATCAAGAATTTAA TTTTGAAATTTTCTTTCTGA
Downstream 100 bases:
>100_bases ATAGATCTGATTTTAAAATTAACTTTGTCCAACTCTGGCAATATCTAAAACATCTGCCATTGATTTAATTTGTTCAATTG TTTTGTGAAGTTGATTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRFKRDITYKKILSLFRNQNGSPFFNAKGLAIGVFSGCFPFFGFQTLIGVFFAKIAKGNIVLAAIGTWISNPFTYIPLYY FNYKVGSIFLTNSSNKILEKGLVIDDLWKQGRIFSLKLLLGSSCVGILLALICGSIVFFIYKIKSKR
Sequences:
>Translated_147_residues MRFKRDITYKKILSLFRNQNGSPFFNAKGLAIGVFSGCFPFFGFQTLIGVFFAKIAKGNIVLAAIGTWISNPFTYIPLYY FNYKVGSIFLTNSSNKILEKGLVIDDLWKQGRIFSLKLLLGSSCVGILLALICGSIVFFIYKIKSKR >Mature_147_residues MRFKRDITYKKILSLFRNQNGSPFFNAKGLAIGVFSGCFPFFGFQTLIGVFFAKIAKGNIVLAAIGTWISNPFTYIPLYY FNYKVGSIFLTNSSNKILEKGLVIDDLWKQGRIFSLKLLLGSSCVGILLALICGSIVFFIYKIKSKR
Specific function: Unknown
COG id: COG3216
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16549; Mature: 16549
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFKRDITYKKILSLFRNQNGSPFFNAKGLAIGVFSGCFPFFGFQTLIGVFFAKIAKGNI CCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCE VLAAIGTWISNPFTYIPLYYFNYKVGSIFLTNSSNKILEKGLVIDDLWKQGRIFSLKLLL EEEEECHHHCCCCEEEEEEEEEEEEEEEEEECCCCHHHHCCCCHHHHHCCCCEEEEHHHH GSSCVGILLALICGSIVFFIYKIKSKR CCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRFKRDITYKKILSLFRNQNGSPFFNAKGLAIGVFSGCFPFFGFQTLIGVFFAKIAKGNI CCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCE VLAAIGTWISNPFTYIPLYYFNYKVGSIFLTNSSNKILEKGLVIDDLWKQGRIFSLKLLL EEEEECHHHCCCCEEEEEEEEEEEEEEEEEECCCCHHHHCCCCHHHHHCCCCEEEEHHHH GSSCVGILLALICGSIVFFIYKIKSKR CCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA